G238850


Basic Information

Item Value
gene id G238850
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 2370049 ~ 2370365 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU270975
CTGAAAAAAGAGTTTAGGCTATTTCATTTACTATTGTATTTGTAAGTTGCTAATTTGCTTCTTTGATCTTTTTATATAGCCTAACAAAAATAACTTATACAATTATAAAATTTATTATATTATGGTCATATTACCCACCCCTGGACCACCCGTACCAGCTGATATACTATGTAGGCCTAGTCTTGATTTGGGTGGTCAATCTGCATTTGAAAGTTTGAAAGGGTTTTAAATCTAGCTAATCAAGTAAAATGACTCAAAATCAAGTAATTTTAGCATGCCAAAGTCAACTTTAATCATATAAAATGTAATCTCCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270975 True 317 lncRNA 0.31 1 2370049 2370365

Neighbor

gene id symbol gene type direction distance location
CI01000055_02152005_02168439 NA coding upstream 201590 2151391 ~ 2168459 (+)
CI01000055_02060775_02077202 NA coding upstream 292563 2060578 ~ 2077486 (+)
CI01000055_02038946_02039783 NA coding upstream 329871 2038729 ~ 2040178 (+)
CI01000055_01961331_01962015 NA coding upstream 407601 1961013 ~ 1962448 (+)
CI01000055_01936268_01937799 C1QTNF1 coding upstream 432207 1936268 ~ 1937842 (+)
CI01000055_02420414_02422942 NA coding downstream 50049 2420414 ~ 2423696 (+)
CI01000055_02425304_02429638 ENPP7.1, ENPP7.2 coding downstream 54939 2425304 ~ 2429719 (+)
CI01000055_02542526_02542861 NA coding downstream 171851 2542216 ~ 2544118 (+)
CI01000055_02601849_02607123 NA coding downstream 230365 2600730 ~ 2607536 (+)
CI01000055_02608904_02621376 RAB40B.L, MGC114680, RAB40B coding downstream 238539 2608904 ~ 2621462 (+)
G238673 NA non-coding upstream 3824 1992402 ~ 2366225 (+)
G238825 NA non-coding upstream 63397 2304241 ~ 2306652 (+)
G238806 NA non-coding upstream 110110 2257469 ~ 2259939 (+)
G238754 NA non-coding upstream 141297 2216637 ~ 2228752 (+)
G238691 NA non-coding upstream 326889 2041235 ~ 2043160 (+)
G238862 NA non-coding downstream 32133 2402498 ~ 2403127 (+)
G239114 NA non-coding downstream 70811 2441176 ~ 2442935 (+)
G239116 NA non-coding downstream 77953 2448318 ~ 2453971 (+)
G239117 NA non-coding downstream 85944 2456309 ~ 2462968 (+)
G239178 NA non-coding downstream 180403 2550768 ~ 2551066 (+)
G238534 NA other upstream 700805 1668410 ~ 1669244 (+)
G237840 NA other upstream 1950117 418925 ~ 419932 (+)
G237680 NA other upstream 2348887 20902 ~ 21162 (+)
G239761 NA other downstream 1791885 4162250 ~ 4213402 (+)
G239755 NA other downstream 1883845 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 1893662 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 2795127 5162990 ~ 5166647 (+)

Expression


Co-expression Network