G239228


Basic Information

Item Value
gene id G239228
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 2717117 ~ 2717394 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU271432
TGTGCTTGGACACAGAGCTCTGTGAACAGCCAGCCTCTTTTGCAATGACCTTTTGTGTCTTGCCCTCCTTGTGCAAGGTGTCAATGGTCGTCTTTTGGACAACTGTCAAGTCAGCAGTCTTCCCCATGATTGTGTAGCCTACAGAACTAGACTGAGAGACCATTTAAAGGCCTTTGCAGATGTTTTGAGTTAATTAGCTGATTAGAGTGTGGCACCAGGTGTCTTCAATATTGAACCTTTTCACAATATTCTAATTTTCTGAGATACTGAATTTGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271432 True 278 lncRNA 0.43 1 2717117 2717394

Neighbor

gene id symbol gene type direction distance location
CI01000055_02646852_02680018 GRIN2C coding upstream 37080 2644350 ~ 2680037 (+)
CI01000055_02608904_02621376 RAB40B.L, MGC114680, RAB40B coding upstream 95655 2608904 ~ 2621462 (+)
CI01000055_02601849_02607123 NA coding upstream 109809 2600730 ~ 2607536 (+)
CI01000055_02542526_02542861 NA coding upstream 174207 2542216 ~ 2544118 (+)
CI01000055_02425304_02429638 ENPP7.1, ENPP7.2 coding upstream 287398 2425304 ~ 2429719 (+)
CI01000055_02729512_02734190 NAT9 coding downstream 12118 2729512 ~ 2734772 (+)
CI01000055_02760466_02767918 NA coding downstream 42717 2760111 ~ 2767934 (+)
CI01000055_02808336_02822398 GABRP, GABRZ coding downstream 90942 2808336 ~ 2822782 (+)
CI01000055_02852816_02861925 ADGRA1A coding downstream 135422 2852816 ~ 2862645 (+)
CI01000055_02883892_02885021 MXTX2 coding downstream 166369 2883763 ~ 2885369 (+)
G239185 NA non-coding upstream 152593 2563630 ~ 2564524 (+)
G239180 NA non-coding upstream 156941 2558972 ~ 2560176 (+)
G239178 NA non-coding upstream 166051 2550768 ~ 2551066 (+)
G239117 NA non-coding upstream 254149 2456309 ~ 2462968 (+)
G239235 NA non-coding downstream 27686 2745080 ~ 2745816 (+)
G239237 NA non-coding downstream 30845 2748239 ~ 2748474 (+)
G239238 NA non-coding downstream 31163 2748557 ~ 2748883 (+)
G239239 NA non-coding downstream 31771 2749165 ~ 2749377 (+)
G238534 NA other upstream 1047873 1668410 ~ 1669244 (+)
G237840 NA other upstream 2297185 418925 ~ 419932 (+)
G237680 NA other upstream 2695955 20902 ~ 21162 (+)
G239761 NA other downstream 1444856 4162250 ~ 4213402 (+)
G239755 NA other downstream 1536816 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 1546633 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 2448098 5162990 ~ 5166647 (+)
G240099 NA other downstream 2819124 5525472 ~ 5544153 (+)

Expression


Co-expression Network