Gene
RNA
| Item | Value |
|---|---|
| gene id | G239235 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 2745080 ~ 2745816 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU271443 | False | 737 | lncRNA | 0.51 | 1 | 2745080 | 2745816 |
| TU271440 | True | 327 | lncRNA | 0.52 | 1 | 2745339 | 2745665 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_02729512_02734190 | NAT9 | coding | upstream | 10308 | 2729512 ~ 2734772 (+) |
| CI01000055_02646852_02680018 | GRIN2C | coding | upstream | 65043 | 2644350 ~ 2680037 (+) |
| CI01000055_02608904_02621376 | RAB40B.L, MGC114680, RAB40B | coding | upstream | 123618 | 2608904 ~ 2621462 (+) |
| CI01000055_02601849_02607123 | NA | coding | upstream | 137772 | 2600730 ~ 2607536 (+) |
| CI01000055_02542526_02542861 | NA | coding | upstream | 202170 | 2542216 ~ 2544118 (+) |
| CI01000055_02760466_02767918 | NA | coding | downstream | 14295 | 2760111 ~ 2767934 (+) |
| CI01000055_02808336_02822398 | GABRP, GABRZ | coding | downstream | 62520 | 2808336 ~ 2822782 (+) |
| CI01000055_02852816_02861925 | ADGRA1A | coding | downstream | 107000 | 2852816 ~ 2862645 (+) |
| CI01000055_02883892_02885021 | MXTX2 | coding | downstream | 137947 | 2883763 ~ 2885369 (+) |
| CI01000055_02886631_02891978 | BMS1 | coding | downstream | 140815 | 2886631 ~ 2892053 (+) |
| G239228 | NA | non-coding | upstream | 27686 | 2717117 ~ 2717394 (+) |
| G239185 | NA | non-coding | upstream | 180556 | 2563630 ~ 2564524 (+) |
| G239180 | NA | non-coding | upstream | 184904 | 2558972 ~ 2560176 (+) |
| G239178 | NA | non-coding | upstream | 194014 | 2550768 ~ 2551066 (+) |
| G239237 | NA | non-coding | downstream | 2423 | 2748239 ~ 2748474 (+) |
| G239238 | NA | non-coding | downstream | 2741 | 2748557 ~ 2748883 (+) |
| G239239 | NA | non-coding | downstream | 3349 | 2749165 ~ 2749377 (+) |
| G239257 | NA | non-coding | downstream | 134240 | 2880056 ~ 2880617 (+) |
| G238534 | NA | other | upstream | 1075836 | 1668410 ~ 1669244 (+) |
| G237840 | NA | other | upstream | 2325148 | 418925 ~ 419932 (+) |
| G237680 | NA | other | upstream | 2723918 | 20902 ~ 21162 (+) |
| G239761 | NA | other | downstream | 1416434 | 4162250 ~ 4213402 (+) |
| G239755 | NA | other | downstream | 1508394 | 4254210 ~ 4255092 (+) |
| CI01000055_04265119_04272728 | NA | other | downstream | 1518211 | 4265119 ~ 4273913 (+) |
| CI01000055_05163240_05166231 | PIGY, PYURF | other | downstream | 2419676 | 5162990 ~ 5166647 (+) |
| G240099 | NA | other | downstream | 2790702 | 5525472 ~ 5544153 (+) |
