G239239


Basic Information

Item Value
gene id G239239
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 2749165 ~ 2749377 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU271449
CCCGACGTGGAGGTAGAGCAGACCTTGATGGTAAGAAGCGTTCATCAAGTTTACTTCCAGTTCTCTGCTCTTGCTTCTCGGCTGGCCAATCGATATTGAGCTTGGCAACAGCGCGAGTAAGCACCTCCATGAGCTCCTCGCTCGCGGGAAAGTGAAGTGGCGAGTCTTCAGTCTCTCCTGTTGTCACGTTAATAACGTCCAGCTCCTCAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271449 True 213 lncRNA 0.53 1 2749165 2749377

Neighbor

gene id symbol gene type direction distance location
CI01000055_02729512_02734190 NAT9 coding upstream 14393 2729512 ~ 2734772 (+)
CI01000055_02646852_02680018 GRIN2C coding upstream 69128 2644350 ~ 2680037 (+)
CI01000055_02608904_02621376 RAB40B.L, MGC114680, RAB40B coding upstream 127703 2608904 ~ 2621462 (+)
CI01000055_02601849_02607123 NA coding upstream 141857 2600730 ~ 2607536 (+)
CI01000055_02542526_02542861 NA coding upstream 206255 2542216 ~ 2544118 (+)
CI01000055_02760466_02767918 NA coding downstream 10734 2760111 ~ 2767934 (+)
CI01000055_02808336_02822398 GABRP, GABRZ coding downstream 58959 2808336 ~ 2822782 (+)
CI01000055_02852816_02861925 ADGRA1A coding downstream 103439 2852816 ~ 2862645 (+)
CI01000055_02883892_02885021 MXTX2 coding downstream 134386 2883763 ~ 2885369 (+)
CI01000055_02886631_02891978 BMS1 coding downstream 137254 2886631 ~ 2892053 (+)
G239238 NA non-coding upstream 282 2748557 ~ 2748883 (+)
G239237 NA non-coding upstream 691 2748239 ~ 2748474 (+)
G239235 NA non-coding upstream 3349 2745080 ~ 2745816 (+)
G239228 NA non-coding upstream 31771 2717117 ~ 2717394 (+)
G239257 NA non-coding downstream 130679 2880056 ~ 2880617 (+)
G239273 NA non-coding downstream 153431 2902808 ~ 2903457 (+)
G239289 NA non-coding downstream 178556 2927933 ~ 2928136 (+)
G239290 NA non-coding downstream 179745 2929122 ~ 2929377 (+)
G238534 NA other upstream 1079921 1668410 ~ 1669244 (+)
G237840 NA other upstream 2329233 418925 ~ 419932 (+)
G237680 NA other upstream 2728003 20902 ~ 21162 (+)
G239761 NA other downstream 1412873 4162250 ~ 4213402 (+)
G239755 NA other downstream 1504833 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 1514650 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 2416115 5162990 ~ 5166647 (+)
G240099 NA other downstream 2787141 5525472 ~ 5544153 (+)

Expression


Co-expression Network