Gene
RNA
| Item | Value |
|---|---|
| gene id | G239411 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 3114053 ~ 3114344 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU271641 | True | 292 | lncRNA | 0.45 | 1 | 3114053 | 3114344 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_02892577_02901154 | BMS1 | coding | upstream | 212227 | 2892475 ~ 2901826 (+) |
| CI01000055_02886631_02891978 | BMS1 | coding | upstream | 222000 | 2886631 ~ 2892053 (+) |
| CI01000055_02883892_02885021 | MXTX2 | coding | upstream | 228684 | 2883763 ~ 2885369 (+) |
| CI01000055_02852816_02861925 | ADGRA1A | coding | upstream | 251408 | 2852816 ~ 2862645 (+) |
| CI01000055_02808336_02822398 | GABRP, GABRZ | coding | upstream | 291271 | 2808336 ~ 2822782 (+) |
| CI01000055_03194041_03223541 | GFRA1B | coding | downstream | 78693 | 3193037 ~ 3223561 (+) |
| CI01000055_03392185_03445744 | ABLIM1 | coding | downstream | 277841 | 3392185 ~ 3446689 (+) |
| CI01000055_03453919_03456503 | NA | coding | downstream | 338986 | 3453330 ~ 3456648 (+) |
| CI01000055_03471384_03476628 | NA | coding | downstream | 356410 | 3470754 ~ 3476855 (+) |
| CI01000055_03482922_03497329 | AFAP1L2 | coding | downstream | 368098 | 3482442 ~ 3497616 (+) |
| G239296 | NA | non-coding | upstream | 179294 | 2934351 ~ 2934759 (+) |
| G239293 | NA | non-coding | upstream | 181617 | 2932202 ~ 2932436 (+) |
| G239292 | NA | non-coding | upstream | 181956 | 2931814 ~ 2932097 (+) |
| G239290 | NA | non-coding | upstream | 184676 | 2929122 ~ 2929377 (+) |
| G239289 | NA | non-coding | upstream | 185917 | 2927933 ~ 2928136 (+) |
| G239412 | NA | non-coding | downstream | 1428 | 3115772 ~ 3115992 (+) |
| G239415 | NA | non-coding | downstream | 4242 | 3118586 ~ 3118804 (+) |
| G239418 | NA | non-coding | downstream | 8522 | 3122866 ~ 3123152 (+) |
| G239424 | NA | non-coding | downstream | 18252 | 3132596 ~ 3132845 (+) |
| G239425 | NA | non-coding | downstream | 19298 | 3133642 ~ 3133865 (+) |
| CI01000055_02542526_02542861 | NA | other | upstream | 569935 | 2542216 ~ 2544118 (+) |
| G238534 | NA | other | upstream | 1444809 | 1668410 ~ 1669244 (+) |
| G237840 | NA | other | upstream | 2694121 | 418925 ~ 419932 (+) |
| G237680 | NA | other | upstream | 3092891 | 20902 ~ 21162 (+) |
| G239761 | NA | other | downstream | 1047906 | 4162250 ~ 4213402 (+) |
| G239755 | NA | other | downstream | 1139866 | 4254210 ~ 4255092 (+) |
| CI01000055_04265119_04272728 | NA | other | downstream | 1149683 | 4265119 ~ 4273913 (+) |
| CI01000055_05163240_05166231 | PIGY, PYURF | other | downstream | 2051148 | 5162990 ~ 5166647 (+) |
| G240099 | NA | other | downstream | 2422174 | 5525472 ~ 5544153 (+) |
