Gene
RNA
| Item | Value |
|---|---|
| gene id | G239415 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 3118586 ~ 3118804 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU271645 | True | 219 | lncRNA | 0.38 | 1 | 3118586 | 3118804 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_02892577_02901154 | BMS1 | coding | upstream | 216760 | 2892475 ~ 2901826 (+) |
| CI01000055_02886631_02891978 | BMS1 | coding | upstream | 226533 | 2886631 ~ 2892053 (+) |
| CI01000055_02883892_02885021 | MXTX2 | coding | upstream | 233217 | 2883763 ~ 2885369 (+) |
| CI01000055_02852816_02861925 | ADGRA1A | coding | upstream | 255941 | 2852816 ~ 2862645 (+) |
| CI01000055_02808336_02822398 | GABRP, GABRZ | coding | upstream | 295804 | 2808336 ~ 2822782 (+) |
| CI01000055_03194041_03223541 | GFRA1B | coding | downstream | 74233 | 3193037 ~ 3223561 (+) |
| CI01000055_03392185_03445744 | ABLIM1 | coding | downstream | 273381 | 3392185 ~ 3446689 (+) |
| CI01000055_03453919_03456503 | NA | coding | downstream | 334526 | 3453330 ~ 3456648 (+) |
| CI01000055_03471384_03476628 | NA | coding | downstream | 351950 | 3470754 ~ 3476855 (+) |
| CI01000055_03482922_03497329 | AFAP1L2 | coding | downstream | 363638 | 3482442 ~ 3497616 (+) |
| G239412 | NA | non-coding | upstream | 2594 | 3115772 ~ 3115992 (+) |
| G239411 | NA | non-coding | upstream | 4242 | 3114053 ~ 3114344 (+) |
| G239296 | NA | non-coding | upstream | 183827 | 2934351 ~ 2934759 (+) |
| G239293 | NA | non-coding | upstream | 186150 | 2932202 ~ 2932436 (+) |
| G239292 | NA | non-coding | upstream | 186489 | 2931814 ~ 2932097 (+) |
| G239418 | NA | non-coding | downstream | 4062 | 3122866 ~ 3123152 (+) |
| G239424 | NA | non-coding | downstream | 13792 | 3132596 ~ 3132845 (+) |
| G239425 | NA | non-coding | downstream | 14838 | 3133642 ~ 3133865 (+) |
| G239426 | NA | non-coding | downstream | 16388 | 3135192 ~ 3135416 (+) |
| G239430 | NA | non-coding | downstream | 23119 | 3141923 ~ 3142146 (+) |
| CI01000055_02542526_02542861 | NA | other | upstream | 574468 | 2542216 ~ 2544118 (+) |
| G238534 | NA | other | upstream | 1449342 | 1668410 ~ 1669244 (+) |
| G237840 | NA | other | upstream | 2698654 | 418925 ~ 419932 (+) |
| G237680 | NA | other | upstream | 3097424 | 20902 ~ 21162 (+) |
| G239761 | NA | other | downstream | 1043446 | 4162250 ~ 4213402 (+) |
| G239755 | NA | other | downstream | 1135406 | 4254210 ~ 4255092 (+) |
| CI01000055_04265119_04272728 | NA | other | downstream | 1145223 | 4265119 ~ 4273913 (+) |
| CI01000055_05163240_05166231 | PIGY, PYURF | other | downstream | 2046688 | 5162990 ~ 5166647 (+) |
| G240099 | NA | other | downstream | 2417714 | 5525472 ~ 5544153 (+) |
