G239418


Basic Information

Item Value
gene id G239418
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3122866 ~ 3123152 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU271648
AATTATATTCACTTTATATTATATTATATTCTCAGAAAGTATATTCACTTTCTTGCTTATTTTGTTGACGTATATTCATTTTCCTGCTTGTTTTCCTTTTTGATTTTTATATGATATTGCAGAGTTTTATTTTTCATGTTATATCAAGTGTACAGTTGTACAGTTTCATTTTTTAAATTGATCATTAATAAAGTATGAAAATACAATTATTAAACACATTATAGATATACTTATAAATCAAGAACAAAGCATTTATAGTTGTATTTATAAACTGCTTACTAATGTCT

Function

NR:

description
PREDICTED: protein ABHD17C

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271648 True 287 lncRNA 0.22 1 3122866 3123152

Neighbor

gene id symbol gene type direction distance location
CI01000055_02892577_02901154 BMS1 coding upstream 221040 2892475 ~ 2901826 (+)
CI01000055_02886631_02891978 BMS1 coding upstream 230813 2886631 ~ 2892053 (+)
CI01000055_02883892_02885021 MXTX2 coding upstream 237497 2883763 ~ 2885369 (+)
CI01000055_02852816_02861925 ADGRA1A coding upstream 260221 2852816 ~ 2862645 (+)
CI01000055_02808336_02822398 GABRP, GABRZ coding upstream 300084 2808336 ~ 2822782 (+)
CI01000055_03194041_03223541 GFRA1B coding downstream 69885 3193037 ~ 3223561 (+)
CI01000055_03392185_03445744 ABLIM1 coding downstream 269033 3392185 ~ 3446689 (+)
CI01000055_03453919_03456503 NA coding downstream 330178 3453330 ~ 3456648 (+)
CI01000055_03471384_03476628 NA coding downstream 347602 3470754 ~ 3476855 (+)
CI01000055_03482922_03497329 AFAP1L2 coding downstream 359290 3482442 ~ 3497616 (+)
G239415 NA non-coding upstream 4062 3118586 ~ 3118804 (+)
G239412 NA non-coding upstream 6874 3115772 ~ 3115992 (+)
G239411 NA non-coding upstream 8522 3114053 ~ 3114344 (+)
G239296 NA non-coding upstream 188107 2934351 ~ 2934759 (+)
G239293 NA non-coding upstream 190430 2932202 ~ 2932436 (+)
G239424 NA non-coding downstream 9444 3132596 ~ 3132845 (+)
G239425 NA non-coding downstream 10490 3133642 ~ 3133865 (+)
G239426 NA non-coding downstream 12040 3135192 ~ 3135416 (+)
G239430 NA non-coding downstream 18771 3141923 ~ 3142146 (+)
G239457 NA non-coding downstream 114836 3237988 ~ 3238197 (+)
CI01000055_02542526_02542861 NA other upstream 578748 2542216 ~ 2544118 (+)
G238534 NA other upstream 1453622 1668410 ~ 1669244 (+)
G237840 NA other upstream 2702934 418925 ~ 419932 (+)
G237680 NA other upstream 3101704 20902 ~ 21162 (+)
G239761 NA other downstream 1039098 4162250 ~ 4213402 (+)
G239755 NA other downstream 1131058 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 1140875 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 2042340 5162990 ~ 5166647 (+)
G240099 NA other downstream 2413366 5525472 ~ 5544153 (+)

Expression


Co-expression Network