G239430


Basic Information

Item Value
gene id G239430
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3141923 ~ 3142146 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU271660
CAAAGAGTATAGAACCCAAGAGGCGAAACTCTGATGCTTTTTGGGTAACAGCCACGAGGTGGCGCTTCGGTAGCGCGGCAGCCATTTTGGGGTGAAAATTCCAACTGGACAATAGAATCCATCACATCTTATGCACCCAAAATCGGCGAATCTCACAGCCAAATCAGAAACGCAATAGAAAATTTCTCAAATTCAGTAAATTTTATGACACCTACAGTAAATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271660 True 224 lncRNA 0.43 1 3141923 3142146

Neighbor

gene id symbol gene type direction distance location
CI01000055_02892577_02901154 BMS1 coding upstream 240097 2892475 ~ 2901826 (+)
CI01000055_02886631_02891978 BMS1 coding upstream 249870 2886631 ~ 2892053 (+)
CI01000055_02883892_02885021 MXTX2 coding upstream 256554 2883763 ~ 2885369 (+)
CI01000055_02852816_02861925 ADGRA1A coding upstream 279278 2852816 ~ 2862645 (+)
CI01000055_02808336_02822398 GABRP, GABRZ coding upstream 319141 2808336 ~ 2822782 (+)
CI01000055_03194041_03223541 GFRA1B coding downstream 50891 3193037 ~ 3223561 (+)
CI01000055_03392185_03445744 ABLIM1 coding downstream 250039 3392185 ~ 3446689 (+)
CI01000055_03453919_03456503 NA coding downstream 311184 3453330 ~ 3456648 (+)
CI01000055_03471384_03476628 NA coding downstream 328608 3470754 ~ 3476855 (+)
CI01000055_03482922_03497329 AFAP1L2 coding downstream 340296 3482442 ~ 3497616 (+)
G239426 NA non-coding upstream 6507 3135192 ~ 3135416 (+)
G239425 NA non-coding upstream 8058 3133642 ~ 3133865 (+)
G239424 NA non-coding upstream 9078 3132596 ~ 3132845 (+)
G239418 NA non-coding upstream 18771 3122866 ~ 3123152 (+)
G239415 NA non-coding upstream 23119 3118586 ~ 3118804 (+)
G239457 NA non-coding downstream 95842 3237988 ~ 3238197 (+)
G239509 NA non-coding downstream 164750 3306896 ~ 3307174 (+)
G239499 NA non-coding downstream 174768 3316914 ~ 3319460 (+)
G239526 NA non-coding downstream 205122 3347268 ~ 3347536 (+)
CI01000055_02542526_02542861 NA other upstream 597805 2542216 ~ 2544118 (+)
G238534 NA other upstream 1472679 1668410 ~ 1669244 (+)
G237840 NA other upstream 2721991 418925 ~ 419932 (+)
G237680 NA other upstream 3120761 20902 ~ 21162 (+)
G239761 NA other downstream 1020104 4162250 ~ 4213402 (+)
G239755 NA other downstream 1112064 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 1121881 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 2023346 5162990 ~ 5166647 (+)
G240099 NA other downstream 2394372 5525472 ~ 5544153 (+)

Expression


Co-expression Network