Gene
RNA
| Item | Value |
|---|---|
| gene id | G240837 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 3231529 ~ 3232186 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU273308 | True | 658 | lncRNA | 0.36 | 1 | 3231529 | 3232186 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_02936803_03111716 | NRG3, NRG3B | coding | downstream | 119813 | 2936803 ~ 3111716 (-) |
| CI01000055_02905189_02913362 | SH2D4BB | coding | downstream | 317979 | 2905000 ~ 2913550 (-) |
| CI01000055_02872903_02877339 | NA | coding | downstream | 354098 | 2872689 ~ 2877431 (-) |
| CI01000055_02735304_02738366 | LRRC59 | coding | downstream | 493163 | 2735304 ~ 2738366 (-) |
| CI01000055_02629406_02631203 | NA | coding | downstream | 598086 | 2629381 ~ 2633443 (-) |
| CI01000055_03242747_03342954 | ATRNL1, ATRNL1B | coding | upstream | 9039 | 3241225 ~ 3343374 (-) |
| CI01000055_03348848_03351995 | TRUB1 | coding | upstream | 116398 | 3348584 ~ 3352005 (-) |
| CI01000055_03367394_03368952 | NA | coding | upstream | 135139 | 3366054 ~ 3368991 (-) |
| CI01000055_03480523_03482073 | NA | coding | upstream | 248025 | 3480211 ~ 3482221 (-) |
| CI01000055_03498800_03512565 | VWA2 | coding | upstream | 265697 | 3497883 ~ 3512565 (-) |
| G240833 | NA | non-coding | downstream | 3897 | 3227390 ~ 3227632 (-) |
| G240784 | NA | non-coding | downstream | 112249 | 3118532 ~ 3119280 (-) |
| G240782 | NA | non-coding | downstream | 115923 | 3115392 ~ 3115606 (-) |
| G240780 | NA | non-coding | downstream | 117096 | 3114005 ~ 3114433 (-) |
| G240779 | NA | non-coding | downstream | 117871 | 3113378 ~ 3113658 (-) |
| G240839 | NA | non-coding | upstream | 1795 | 3233981 ~ 3234204 (-) |
| G240843 | NA | non-coding | upstream | 101284 | 3333470 ~ 3339470 (-) |
| G240851 | NA | non-coding | upstream | 121453 | 3353639 ~ 3356443 (-) |
| G240876 | NA | non-coding | upstream | 217540 | 3449726 ~ 3450015 (-) |
| G240825 | NA | other | downstream | 13935 | 3216174 ~ 3217594 (-) |
| G240723 | NA | other | downstream | 482177 | 2748835 ~ 2749352 (-) |
| G238932 | NA | other | downstream | 912475 | 2311659 ~ 2319054 (-) |
| G238867 | NA | other | downstream | 1937006 | 1281108 ~ 1294523 (-) |
| G238481 | NA | other | downstream | 1966721 | 1263634 ~ 1264808 (-) |
| CI01000055_03616564_03618430 | NA | other | upstream | 384160 | 3616555 ~ 3618430 (-) |
| G240975 | NA | other | upstream | 485465 | 3717651 ~ 3733995 (-) |
| CI01000055_03918168_03965674 | TCF7L2 | other | upstream | 679116 | 3911302 ~ 3966460 (-) |
| CI01000055_04744063_04763284 | FAM19A5, FAM19A5B | other | upstream | 1511520 | 4743706 ~ 4764067 (-) |
| CI01000055_05338403_05341971 | NA | other | upstream | 2102099 | 5338403 ~ 5341971 (-) |
