G239457


Basic Information

Item Value
gene id G239457
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3237988 ~ 3238197 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU271689
AAAAAACAAAAAACAAAAAAAAAAACCCATTGACTTCAGGACAAAGTGCTAAAATGCTAACTCGTTCATGGAGGAAAATAAAACTGTTCCTTCTAACATAAAGTGTCCCAAAGAAGCATGCGCCAATGTGAGTAAAAAAAACAATCTCCTCCTTGCAGATCTTGGTGTTACAGGCGTCATAAGGATGAATGATTTATCCATAACCATCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271689 True 210 lncRNA 0.36 1 3237988 3238197

Neighbor

gene id symbol gene type direction distance location
CI01000055_03194041_03223541 GFRA1B coding upstream 14427 3193037 ~ 3223561 (+)
CI01000055_02892577_02901154 BMS1 coding upstream 336162 2892475 ~ 2901826 (+)
CI01000055_02886631_02891978 BMS1 coding upstream 345935 2886631 ~ 2892053 (+)
CI01000055_02883892_02885021 MXTX2 coding upstream 352619 2883763 ~ 2885369 (+)
CI01000055_02852816_02861925 ADGRA1A coding upstream 375343 2852816 ~ 2862645 (+)
CI01000055_03392185_03445744 ABLIM1 coding downstream 153988 3392185 ~ 3446689 (+)
CI01000055_03453919_03456503 NA coding downstream 215133 3453330 ~ 3456648 (+)
CI01000055_03471384_03476628 NA coding downstream 232557 3470754 ~ 3476855 (+)
CI01000055_03482922_03497329 AFAP1L2 coding downstream 244245 3482442 ~ 3497616 (+)
CI01000055_03532706_03537026 NA coding downstream 293177 3531374 ~ 3537194 (+)
G239430 NA non-coding upstream 95842 3141923 ~ 3142146 (+)
G239426 NA non-coding upstream 102572 3135192 ~ 3135416 (+)
G239425 NA non-coding upstream 104123 3133642 ~ 3133865 (+)
G239424 NA non-coding upstream 105143 3132596 ~ 3132845 (+)
G239418 NA non-coding upstream 114836 3122866 ~ 3123152 (+)
G239509 NA non-coding downstream 68699 3306896 ~ 3307174 (+)
G239499 NA non-coding downstream 78717 3316914 ~ 3319460 (+)
G239526 NA non-coding downstream 109071 3347268 ~ 3347536 (+)
G239535 NA non-coding downstream 270920 3509117 ~ 3518130 (+)
CI01000055_02542526_02542861 NA other upstream 693870 2542216 ~ 2544118 (+)
G238534 NA other upstream 1568744 1668410 ~ 1669244 (+)
G237840 NA other upstream 2818056 418925 ~ 419932 (+)
G237680 NA other upstream 3216826 20902 ~ 21162 (+)
G239761 NA other downstream 924053 4162250 ~ 4213402 (+)
G239755 NA other downstream 1016013 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 1025830 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 1927295 5162990 ~ 5166647 (+)
G240099 NA other downstream 2298321 5525472 ~ 5544153 (+)

Expression


Co-expression Network