Gene
RNA
| Item | Value |
|---|---|
| gene id | G239509 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 3306896 ~ 3307174 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU271744 | True | 205 | lncRNA | 0.37 | 2 | 3306896 | 3307174 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_03194041_03223541 | GFRA1B | coding | upstream | 83335 | 3193037 ~ 3223561 (+) |
| CI01000055_02892577_02901154 | BMS1 | coding | upstream | 405070 | 2892475 ~ 2901826 (+) |
| CI01000055_02886631_02891978 | BMS1 | coding | upstream | 414843 | 2886631 ~ 2892053 (+) |
| CI01000055_02883892_02885021 | MXTX2 | coding | upstream | 421527 | 2883763 ~ 2885369 (+) |
| CI01000055_02852816_02861925 | ADGRA1A | coding | upstream | 444251 | 2852816 ~ 2862645 (+) |
| CI01000055_03392185_03445744 | ABLIM1 | coding | downstream | 85011 | 3392185 ~ 3446689 (+) |
| CI01000055_03453919_03456503 | NA | coding | downstream | 146156 | 3453330 ~ 3456648 (+) |
| CI01000055_03471384_03476628 | NA | coding | downstream | 163580 | 3470754 ~ 3476855 (+) |
| CI01000055_03482922_03497329 | AFAP1L2 | coding | downstream | 175268 | 3482442 ~ 3497616 (+) |
| CI01000055_03532706_03537026 | NA | coding | downstream | 224200 | 3531374 ~ 3537194 (+) |
| G239457 | NA | non-coding | upstream | 68699 | 3237988 ~ 3238197 (+) |
| G239430 | NA | non-coding | upstream | 164750 | 3141923 ~ 3142146 (+) |
| G239426 | NA | non-coding | upstream | 171480 | 3135192 ~ 3135416 (+) |
| G239425 | NA | non-coding | upstream | 173031 | 3133642 ~ 3133865 (+) |
| G239424 | NA | non-coding | upstream | 174051 | 3132596 ~ 3132845 (+) |
| G239499 | NA | non-coding | downstream | 9740 | 3316914 ~ 3319460 (+) |
| G239526 | NA | non-coding | downstream | 40094 | 3347268 ~ 3347536 (+) |
| G239535 | NA | non-coding | downstream | 201943 | 3509117 ~ 3518130 (+) |
| G239546 | NA | non-coding | downstream | 273727 | 3580901 ~ 3581110 (+) |
| CI01000055_02542526_02542861 | NA | other | upstream | 762778 | 2542216 ~ 2544118 (+) |
| G238534 | NA | other | upstream | 1637652 | 1668410 ~ 1669244 (+) |
| G237840 | NA | other | upstream | 2886964 | 418925 ~ 419932 (+) |
| G237680 | NA | other | upstream | 3285734 | 20902 ~ 21162 (+) |
| G239761 | NA | other | downstream | 855076 | 4162250 ~ 4213402 (+) |
| G239755 | NA | other | downstream | 947036 | 4254210 ~ 4255092 (+) |
| CI01000055_04265119_04272728 | NA | other | downstream | 956853 | 4265119 ~ 4273913 (+) |
| CI01000055_05163240_05166231 | PIGY, PYURF | other | downstream | 1858318 | 5162990 ~ 5166647 (+) |
| G240099 | NA | other | downstream | 2229344 | 5525472 ~ 5544153 (+) |
