G239526


Basic Information

Item Value
gene id G239526
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3347268 ~ 3347536 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU271761
TGGACAGAGAGTCTGGGAGCAGAGAAGTTGAATGTGATCTTAATCCTTGACTAAGAGGGATTAGTATCCAAGTACGCTGATTGTGAACATAAAAACAGTCTAAAAACCAGATTCGATCGGCAAGAGACTATCCCCCAGTTTCACAGACAAGGCTTAAGCCTAGCCCCAGACTAAAATGCAAGTTTGAGCTGTTTTAACTTAAAGCAACTTACACTTACATATCTTAAAATATGTCAGTGCCATTGTTTTGTTTCAAGATGCACACCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271761 True 269 lncRNA 0.40 1 3347268 3347536

Neighbor

gene id symbol gene type direction distance location
CI01000055_03194041_03223541 GFRA1B coding upstream 123707 3193037 ~ 3223561 (+)
CI01000055_02892577_02901154 BMS1 coding upstream 445442 2892475 ~ 2901826 (+)
CI01000055_02886631_02891978 BMS1 coding upstream 455215 2886631 ~ 2892053 (+)
CI01000055_02883892_02885021 MXTX2 coding upstream 461899 2883763 ~ 2885369 (+)
CI01000055_02852816_02861925 ADGRA1A coding upstream 484623 2852816 ~ 2862645 (+)
CI01000055_03392185_03445744 ABLIM1 coding downstream 44649 3392185 ~ 3446689 (+)
CI01000055_03453919_03456503 NA coding downstream 105794 3453330 ~ 3456648 (+)
CI01000055_03471384_03476628 NA coding downstream 123218 3470754 ~ 3476855 (+)
CI01000055_03482922_03497329 AFAP1L2 coding downstream 134906 3482442 ~ 3497616 (+)
CI01000055_03532706_03537026 NA coding downstream 183838 3531374 ~ 3537194 (+)
G239499 NA non-coding upstream 27808 3316914 ~ 3319460 (+)
G239509 NA non-coding upstream 40094 3306896 ~ 3307174 (+)
G239457 NA non-coding upstream 109071 3237988 ~ 3238197 (+)
G239430 NA non-coding upstream 205122 3141923 ~ 3142146 (+)
G239426 NA non-coding upstream 211852 3135192 ~ 3135416 (+)
G239535 NA non-coding downstream 161581 3509117 ~ 3518130 (+)
G239546 NA non-coding downstream 233365 3580901 ~ 3581110 (+)
G239565 NA non-coding downstream 277247 3624783 ~ 3625005 (+)
G239598 NA non-coding downstream 357488 3705024 ~ 3705225 (+)
CI01000055_02542526_02542861 NA other upstream 803150 2542216 ~ 2544118 (+)
G238534 NA other upstream 1678024 1668410 ~ 1669244 (+)
G237840 NA other upstream 2927336 418925 ~ 419932 (+)
G237680 NA other upstream 3326106 20902 ~ 21162 (+)
G239761 NA other downstream 814714 4162250 ~ 4213402 (+)
G239755 NA other downstream 906674 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 916491 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 1817956 5162990 ~ 5166647 (+)
G240099 NA other downstream 2188982 5525472 ~ 5544153 (+)

Expression


Co-expression Network