Gene
RNA
| Item | Value |
|---|---|
| gene id | G240877 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 3450285 ~ 3450534 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU273357 | True | 250 | lncRNA | 0.33 | 1 | 3450285 | 3450534 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_03367394_03368952 | NA | coding | downstream | 81294 | 3366054 ~ 3368991 (-) |
| CI01000055_03348848_03351995 | TRUB1 | coding | downstream | 98280 | 3348584 ~ 3352005 (-) |
| CI01000055_03242747_03342954 | ATRNL1, ATRNL1B | coding | downstream | 106911 | 3241225 ~ 3343374 (-) |
| CI01000055_02936803_03111716 | NRG3, NRG3B | coding | downstream | 338569 | 2936803 ~ 3111716 (-) |
| CI01000055_02905189_02913362 | SH2D4BB | coding | downstream | 536735 | 2905000 ~ 2913550 (-) |
| CI01000055_03480523_03482073 | NA | coding | upstream | 29677 | 3480211 ~ 3482221 (-) |
| CI01000055_03498800_03512565 | VWA2 | coding | upstream | 47349 | 3497883 ~ 3512565 (-) |
| CI01000055_03518013_03528878 | NA | coding | upstream | 67020 | 3517554 ~ 3528878 (-) |
| CI01000055_03574677_03575939 | ADRB1 | coding | upstream | 122802 | 3573336 ~ 3575939 (-) |
| CI01000055_03585354_03604468 | NHLRC2 | coding | upstream | 133546 | 3584080 ~ 3604468 (-) |
| G240876 | NA | non-coding | downstream | 270 | 3449726 ~ 3450015 (-) |
| G240851 | NA | non-coding | downstream | 93842 | 3353639 ~ 3356443 (-) |
| G240843 | NA | non-coding | downstream | 110815 | 3333470 ~ 3339470 (-) |
| G240839 | NA | non-coding | downstream | 216081 | 3233981 ~ 3234204 (-) |
| G240878 | NA | non-coding | upstream | 108 | 3450642 ~ 3450854 (-) |
| G240881 | NA | non-coding | upstream | 2753 | 3453287 ~ 3453502 (-) |
| G240885 | NA | non-coding | upstream | 43666 | 3494200 ~ 3494864 (-) |
| G240884 | NA | non-coding | upstream | 113279 | 3563813 ~ 3565842 (-) |
| G240949 | NA | non-coding | upstream | 208982 | 3659516 ~ 3665515 (-) |
| G240825 | NA | other | downstream | 232691 | 3216174 ~ 3217594 (-) |
| G240723 | NA | other | downstream | 700933 | 2748835 ~ 2749352 (-) |
| G238932 | NA | other | downstream | 1131231 | 2311659 ~ 2319054 (-) |
| G238867 | NA | other | downstream | 2155762 | 1281108 ~ 1294523 (-) |
| G238481 | NA | other | downstream | 2185477 | 1263634 ~ 1264808 (-) |
| CI01000055_03616564_03618430 | NA | other | upstream | 165812 | 3616555 ~ 3618430 (-) |
| G240975 | NA | other | upstream | 267117 | 3717651 ~ 3733995 (-) |
| CI01000055_03918168_03965674 | TCF7L2 | other | upstream | 460768 | 3911302 ~ 3966460 (-) |
| CI01000055_04744063_04763284 | FAM19A5, FAM19A5B | other | upstream | 1293172 | 4743706 ~ 4764067 (-) |
| CI01000055_05338403_05341971 | NA | other | upstream | 1883751 | 5338403 ~ 5341971 (-) |
