G239546


Basic Information

Item Value
gene id G239546
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3580901 ~ 3581110 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU271782
CACTCAGCCATTGCCCACACACCTCACAATCTTGTCTGGTCTCAACTACGGGCAATAGACTAATACCCGCTTTATTTAGGCCAACCTTTTGGATATCCCTGTGATACTCCAGCGATCTCCTTGTAAATCTCCAACAATCTCACTGTGATACTCAAGCAATCTCTTGTAAGCTACTCTTTTGAATATTGCACATACCTGTCTACTACTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271782 True 210 lncRNA 0.43 1 3580901 3581110

Neighbor

gene id symbol gene type direction distance location
CI01000055_03539420_03563869 CCDC186 coding upstream 17006 3539148 ~ 3563895 (+)
CI01000055_03532706_03537026 NA coding upstream 43707 3531374 ~ 3537194 (+)
CI01000055_03482922_03497329 AFAP1L2 coding upstream 83285 3482442 ~ 3497616 (+)
CI01000055_03471384_03476628 NA coding upstream 104046 3470754 ~ 3476855 (+)
CI01000055_03453919_03456503 NA coding upstream 124253 3453330 ~ 3456648 (+)
CI01000055_03604945_03612832 DCLRE1A coding downstream 23835 3604945 ~ 3613140 (+)
CI01000055_03653282_03656353 NA coding downstream 72098 3653208 ~ 3656423 (+)
CI01000055_03667192_03685378 NRAP coding downstream 85626 3666736 ~ 3685893 (+)
CI01000055_03717618_03733174 THBS2, THBS2B coding downstream 134943 3716053 ~ 3733597 (+)
CI01000055_03745295_03748598 KCNK1A coding downstream 162375 3743485 ~ 3749226 (+)
G239535 NA non-coding upstream 62771 3509117 ~ 3518130 (+)
CI01000055_03392185_03445744 ABLIM1 non-coding upstream 184603 3392185 ~ 3446689 (+)
G239526 NA non-coding upstream 233365 3347268 ~ 3347536 (+)
G239499 NA non-coding upstream 261441 3316914 ~ 3319460 (+)
G239509 NA non-coding upstream 273727 3306896 ~ 3307174 (+)
G239565 NA non-coding downstream 43673 3624783 ~ 3625005 (+)
G239598 NA non-coding downstream 123914 3705024 ~ 3705225 (+)
G239599 NA non-coding downstream 126357 3707467 ~ 3708004 (+)
G239646 NA non-coding downstream 288622 3869732 ~ 3925859 (+)
G239643 NA non-coding downstream 299256 3880366 ~ 3965963 (+)
CI01000055_02542526_02542861 NA other upstream 1036783 2542216 ~ 2544118 (+)
G238534 NA other upstream 1911657 1668410 ~ 1669244 (+)
G237840 NA other upstream 3160969 418925 ~ 419932 (+)
G237680 NA other upstream 3559739 20902 ~ 21162 (+)
G239761 NA other downstream 581140 4162250 ~ 4213402 (+)
G239755 NA other downstream 673100 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 682917 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 1584382 5162990 ~ 5166647 (+)
G240099 NA other downstream 1955408 5525472 ~ 5544153 (+)

Expression


Co-expression Network