G239565


Basic Information

Item Value
gene id G239565
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3624783 ~ 3625005 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU271801
CTGTTCATCATGAGTTTGTAATAAGAATTTAGTTGTGGAAACCATCAGTCATACGTGAATAAACTCATAGATGAGATATATTAGTACTTATAATGTGGTACATCAGAAATAAAAGATTACCATATTCAACTGGATGCACTTTACATTATTTTATAACATCAGATTATTTACCCATGAGCCATTTTTTATTTTTTAGTAGGAACAATTACATTTTTTGACCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271801 True 223 lncRNA 0.29 1 3624783 3625005

Neighbor

gene id symbol gene type direction distance location
CI01000055_03604945_03612832 DCLRE1A coding upstream 11643 3604945 ~ 3613140 (+)
CI01000055_03539420_03563869 CCDC186 coding upstream 60888 3539148 ~ 3563895 (+)
CI01000055_03532706_03537026 NA coding upstream 87589 3531374 ~ 3537194 (+)
CI01000055_03482922_03497329 AFAP1L2 coding upstream 127167 3482442 ~ 3497616 (+)
CI01000055_03471384_03476628 NA coding upstream 147928 3470754 ~ 3476855 (+)
CI01000055_03653282_03656353 NA coding downstream 28203 3653208 ~ 3656423 (+)
CI01000055_03667192_03685378 NRAP coding downstream 41731 3666736 ~ 3685893 (+)
CI01000055_03717618_03733174 THBS2, THBS2B coding downstream 91048 3716053 ~ 3733597 (+)
CI01000055_03745295_03748598 KCNK1A coding downstream 118480 3743485 ~ 3749226 (+)
CI01000055_03752947_03764493 SLC35F3A coding downstream 127942 3752947 ~ 3765045 (+)
G239546 NA non-coding upstream 43673 3580901 ~ 3581110 (+)
G239535 NA non-coding upstream 106653 3509117 ~ 3518130 (+)
CI01000055_03392185_03445744 ABLIM1 non-coding upstream 228485 3392185 ~ 3446689 (+)
G239526 NA non-coding upstream 277247 3347268 ~ 3347536 (+)
G239499 NA non-coding upstream 305323 3316914 ~ 3319460 (+)
G239598 NA non-coding downstream 80019 3705024 ~ 3705225 (+)
G239599 NA non-coding downstream 82462 3707467 ~ 3708004 (+)
G239646 NA non-coding downstream 244727 3869732 ~ 3925859 (+)
G239643 NA non-coding downstream 255361 3880366 ~ 3965963 (+)
G239748 NA non-coding downstream 501522 4126527 ~ 4127026 (+)
CI01000055_02542526_02542861 NA other upstream 1080665 2542216 ~ 2544118 (+)
G238534 NA other upstream 1955539 1668410 ~ 1669244 (+)
G237840 NA other upstream 3204851 418925 ~ 419932 (+)
G237680 NA other upstream 3603621 20902 ~ 21162 (+)
G239761 NA other downstream 537245 4162250 ~ 4213402 (+)
G239755 NA other downstream 629205 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 639022 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 1540487 5162990 ~ 5166647 (+)
G240099 NA other downstream 1911513 5525472 ~ 5544153 (+)

Expression


Co-expression Network