G239598


Basic Information

Item Value
gene id G239598
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3705024 ~ 3705225 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU271840
AAAGCGAACGTGCAAAGACTAAGTCAAACGACCTTTACAAAAAAAAGGTAAAACAACGATGTCGGACAATTTTGAAGTTGGAGGAGAAAATGAGAGAAAATTGGGTTTTTCGCCCTACCGCGGTACTTCCGACTACGTCACGTGTGACATTTCCAACGTTATTACGTAATGTGTGGTGGATTGCAGAGCAGTGCAAGACGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU271840 True 202 lncRNA 0.43 1 3705024 3705225

Neighbor

gene id symbol gene type direction distance location
CI01000055_03667192_03685378 NRAP coding upstream 19131 3666736 ~ 3685893 (+)
CI01000055_03653282_03656353 NA coding upstream 48601 3653208 ~ 3656423 (+)
CI01000055_03604945_03612832 DCLRE1A coding upstream 91884 3604945 ~ 3613140 (+)
CI01000055_03539420_03563869 CCDC186 coding upstream 141129 3539148 ~ 3563895 (+)
CI01000055_03532706_03537026 NA coding upstream 167830 3531374 ~ 3537194 (+)
CI01000055_03717618_03733174 THBS2, THBS2B coding downstream 10828 3716053 ~ 3733597 (+)
CI01000055_03745295_03748598 KCNK1A coding downstream 38260 3743485 ~ 3749226 (+)
CI01000055_03752947_03764493 SLC35F3A coding downstream 47722 3752947 ~ 3765045 (+)
CI01000055_03795753_03805149 ALDH18A1, P5CS coding downstream 90478 3795703 ~ 3806779 (+)
CI01000055_03903278_03905608 NA coding downstream 197865 3903090 ~ 3905734 (+)
G239565 NA non-coding upstream 80019 3624783 ~ 3625005 (+)
G239546 NA non-coding upstream 123914 3580901 ~ 3581110 (+)
G239535 NA non-coding upstream 186894 3509117 ~ 3518130 (+)
CI01000055_03392185_03445744 ABLIM1 non-coding upstream 308726 3392185 ~ 3446689 (+)
G239526 NA non-coding upstream 357488 3347268 ~ 3347536 (+)
G239599 NA non-coding downstream 2242 3707467 ~ 3708004 (+)
G239646 NA non-coding downstream 164507 3869732 ~ 3925859 (+)
G239643 NA non-coding downstream 175141 3880366 ~ 3965963 (+)
G239748 NA non-coding downstream 421302 4126527 ~ 4127026 (+)
G239754 NA non-coding downstream 544293 4249518 ~ 4250917 (+)
CI01000055_02542526_02542861 NA other upstream 1160906 2542216 ~ 2544118 (+)
G238534 NA other upstream 2035780 1668410 ~ 1669244 (+)
G237840 NA other upstream 3285092 418925 ~ 419932 (+)
G237680 NA other upstream 3683862 20902 ~ 21162 (+)
G239761 NA other downstream 457025 4162250 ~ 4213402 (+)
G239755 NA other downstream 548985 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 558802 4265119 ~ 4273913 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 1460267 5162990 ~ 5166647 (+)
G240099 NA other downstream 1831293 5525472 ~ 5544153 (+)

Expression


Co-expression Network