Gene
RNA
| Item | Value |
|---|---|
| gene id | G241061 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 4029690 ~ 4036639 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU273570 | False | 477 | lncRNA | 0.54 | 4 | 4029690 | 4036639 |
| TU273569 | True | 342 | lncRNA | 0.56 | 2 | 4032172 | 4036639 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_03918168_03965674 | TCF7L2 | coding | downstream | 63230 | 3911302 ~ 3966460 (-) |
| CI01000055_03880394_03898922 | TCF7L2 | coding | downstream | 130755 | 3880269 ~ 3898935 (-) |
| CI01000055_03810913_03811894 | CRYGMXL2 | coding | downstream | 217796 | 3810550 ~ 3811894 (-) |
| CI01000055_03808541_03810277 | CRYGMX | coding | downstream | 219200 | 3808293 ~ 3810490 (-) |
| CI01000055_03783468_03784414 | NA | coding | downstream | 245177 | 3782685 ~ 3784513 (-) |
| CI01000055_04132203_04169742 | CA16C, PTPRZ1 | coding | upstream | 95446 | 4132085 ~ 4169742 (-) |
| CI01000055_04232088_04245445 | AGBL2 | coding | upstream | 195303 | 4231942 ~ 4245445 (-) |
| CI01000055_04247379_04257962 | FNBP4 | coding | upstream | 210740 | 4247379 ~ 4257962 (-) |
| CI01000055_04259719_04260531 | LRRC10 | coding | upstream | 222740 | 4259379 ~ 4261670 (-) |
| CI01000055_04274970_04286910 | KIAA1033 | coding | upstream | 238331 | 4274970 ~ 4287125 (-) |
| G241055 | NA | non-coding | downstream | 29 | 4023186 ~ 4029661 (-) |
| G241051 | NA | non-coding | downstream | 40593 | 3988668 ~ 3989097 (-) |
| G241048 | NA | non-coding | downstream | 156633 | 3872743 ~ 3873057 (-) |
| G241037 | NA | non-coding | downstream | 179318 | 3850138 ~ 3850372 (-) |
| G241028 | NA | non-coding | downstream | 196689 | 3832495 ~ 3833001 (-) |
| G241146 | NA | non-coding | upstream | 23878 | 4060517 ~ 4068333 (-) |
| G241145 | NA | non-coding | upstream | 34787 | 4071426 ~ 4076408 (-) |
| G241132 | NA | non-coding | upstream | 183879 | 4220518 ~ 4221053 (-) |
| G241191 | NA | non-coding | upstream | 236396 | 4273035 ~ 4273278 (-) |
| G241215 | NA | non-coding | upstream | 317984 | 4354623 ~ 4355566 (-) |
| G240975 | NA | other | downstream | 295695 | 3717651 ~ 3733995 (-) |
| CI01000055_03616564_03618430 | NA | other | downstream | 410046 | 3616555 ~ 3618430 (-) |
| G240825 | NA | other | downstream | 812096 | 3216174 ~ 3217594 (-) |
| G240723 | NA | other | downstream | 1280338 | 2748835 ~ 2749352 (-) |
| CI01000055_04744063_04763284 | FAM19A5, FAM19A5B | other | upstream | 707067 | 4743706 ~ 4764067 (-) |
| CI01000055_05338403_05341971 | NA | other | upstream | 1297646 | 5338403 ~ 5341971 (-) |
| G241542 | NA | other | upstream | 1524704 | 5561343 ~ 5565783 (-) |
| G241646 | NA | other | upstream | 1805555 | 5842194 ~ 5847572 (-) |
| CI01000055_06036788_06037622 | CARTPT, CART2 | other | upstream | 1999945 | 6036472 ~ 6037728 (-) |
