XLOC_010020 (sema6e)


Basic Information

Item Value
gene id XLOC_010020
gene name sema6e
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 30002605 ~ 30271444 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019937
CAAGGATTTACAGTTCAAACAGTTCACGTTTTGGGTGGGACTTGTAAGAAACTTTTAAAGAGAACCATCAAAAACACTCCGGCAGATCCTTATTGGACGGGCAAACTGTCAGTCGCACACCATGGGCGTGGTCTGGGAGCGATCGTTCACAATGTAATAGAGTTTTAGCGCAGTCTTGCTTTTTCAAAGGCGTGTGTCAACTCTGTGTGCCAAGGGCTGCTCCGCTTTTACCAATGCGATTAATGAAGACAACGAACCAATTGAGGGAACACTAAACTAATAACCTTCCGTTTCGTTTCGTCTGTTGTTTTTAATACGGACGAGCTTCGTCTCTGCAAGGAATCAACCCTCTGCACGAGCACAAAGGAAAATTTAAAAGGCAAGCAAAGgtggtCTTCAGTCTACTCTGGGTCATGCTGTGTGGCTGAATTCTATGCTGTAGCTGAAATGAGGTTGGTGATTTTGGGGTCGCGGCCCCTTTTGGCCTTGACCCTCATGCTCACCCTCACCTGCCTAAAGCATCTGTGCCATGGTGCAACACCCTTTCCTCAGGATCTGGAACCCATCAGGACCGTTGGTAGTGAACACACCTACCTGTACCCCAGTTTCCAGGGGAACATGTCAGATAACGACACCGCCAGACTGGGCCTGGATTTTCAGAGGATGCTGCGGATTAACCACATGGTCTACATCGCTGCAAGAGATCACGTTTTTGCCATTAACCTCAGTGCTTCATTGGAGCGCATCGTCCCCCAACAGAAACTGACATGGAAGACAAAAGATGTGGAGAAATGCACAGTCAGGGGGAAAAACAGCGATGAGTGTTACAACTACATCAAAGTGCTGGTGCCACGTAACGATGAAACCCTCTTTGCGTGCGGAACCAATGCGTTCAACCCCACCTGTCGCAACTACAAGATGTCATCTCTAGAGCAGGACGGAGAAGAGGTGATCGGTCAAGCCCGCTGCCCTTTCGAGTCCCGCCAGTCCAACGTTGGCCTGTTTGCCGGCGGTGACTTCTACTCAGCCACGATGACTGATTTTCTAGCGAGCGATGCAGTGATTTACCGAAGTTTAGGAGAAAGCAGTCCTGTCCTGCGTACTGTAAAATATGACTCCAAGTGGCTGCGAGaaCCGCATTTTCTTCATGCCATCGAGTATGGGAACTACGTGTACTTCTTCCTCAGTGAGATTGCAGTGGAGTATACCACCCTTGGCAAGGTGGTGTTTTCCCGAGTGGCTCGCGTGTGTAAGAATGATAACGGCGGTTCTCCACGGGTTCTAGAAAGATACTGGACGTCTTTCCTGAAGGCCCGGTTAAACTGCTCAGTTCCTGGTGACTCTTTTTTCTACTTTGATGTTCTTCAGTCATTAACAAACGTCATGCAGATCAACCACAGGCCTGCAGTGTTGGGCGTCTTTACCACTCAAGCCAACAGCATCACTGGTTCTGCTGTATGTGCATTTTACATGGATGACATAGAGAAAGTGTTCAATGGGAAGTTTAAGGAGCAGCGAAACAGCGAGTCCGCCTGGACACCAGTTCCTGATGAAGCGGTGCCCAAACCCCGgCCAGGGTCGTGTGCTGGTGATGGCCCTGCTGCTGGTTACAAGTCCTCCACAAATTTCCCTGATGAGACTCTTACCTTCATTAAGTCTTATCCACTAATGGACGAGGCTGTGCCGTCTGTCAACAACCGACCCTGCTTCACACGAACCACCAGCAGGTTCAAGCTGACCCAGATTGCAGTGGACACGGCAGCTGGCCCATATAAGAACTACACTGTCGTGTTTCTGGGGTCAGAAAATGGACATGTCCTGAAGGTTTTAGCTAGCATGCATCCAAACTCCTCGTACAGCACTCAGGTTTTGGAGGACATCGATGTTTACAACCCTAACAAATGTAATGTGCGTGGGGAGGACCGGAGGATTCTGGGATTGGAGCTGGATAAAGACCATCATGCCCTGTTTGTGGCCTTTACAGGTTGCGTAATCCGTGTTCCACTCAGTCGCTGTTCGGATTATGGAATCTGCAGAAAgaGCTGCCTGTCCTCACGAGACCCCTATTGCATCTGGCTGAGCGCAGGGAACTGTGCCACGGTGGCGCCGGGATTCAAGTCTGGATTCGAGCAGTATGTAGAGAGTGGATATCCTCAGTATCCAGACAGCTGTCACGATGTCTTGGCAACGACTCGAAAGCAGAACCCTGCAGTGGACTCTGCATACGGAAAGACCTCACCCACAAGTGCCAGCACAACCAATCAGGGGCCAGCTGGTGCCCCTGAGACAGGTACCCACCCCGAGGAGGGGAGGCGGGGAGGGCAGGGGTCTCCTGACTTGGAGCCCGGCAGTGTGGAGATGGAGGGAGTGCGCCGACCCCCTGAGGTTGATAAGTCCAACCACAGTGTTCACTACACCCTGCTCATAGCGTGTGTCCTGGTGGCGTTCGTCCTGGGAGCTTTCCTCTCCGGATTCCTTGTTTCCTGTTACTGCAACCACAACGTTAACAAGACGAAAAGGCTGTCGAAAGATCCAGAAGCGCCGATCCCACATGCTCTCTCCCTGCGCAGCTTGGCCAAGCTCAATGGCTTGCTGGAGAGCCAAAACAAGGACGAGAAACTAGAGGTGTCCTCACCCAAACTCTACAACTCATTCTTTGCCAATGGGAAAGAGCAAGCACATCGCAGGAATGCCCACCATGCTGCCATGACAGAGCTCATTCACCCACATCATCACCACTCTGCTGAGCTCTCCGGCCTTCCCACACCAGATTCGACACCAGAGCTCCCAATCAAGAGCATGAAGGCCTTTAAGAACCAGTGGGAGAAGAACCAAAACTGCAATAACGCTAAAGAACCCAAGTCCCACAATATGGGAGCATCACGGCCAACAAGTGCAATGCAGCATCAGATGTTCCCTTTCTCTCATGGGCTGACTAATGGACAGGTACTAGGTGGCTCCGTACACATGGACGAACGGAAAGTCCACAACACGGAGCGTGTGGTAAGCCAACCGTATCACTGCTACCCGCACAAGATTGTGGACGTCACCTCACTTGACGAGCTTTTAAAACATATTCATGAAATCAACGTGGCCACAGGCAAGAGTCCCAGCGTCCTCACCTCGTCCATGTCAGCCAACGCCGGTCAGATGGCGTTCGCCAATCGCGTACAGCCACACATCCCAGAAACAGAGTCCGCACCATACTACAGTTCCTCTACACTTCCTCGGGACAGTCTCACTCGTCGCATGGACATCCCACCAGAAATTCCTCCCCATCATCAGTCCACCCTAGAGAGAGTGTCCCGTCACCCAGCTCAACGCCACTCTCTGATAACCACCCCCAAGATGCCCAGTGGGGGTGTAGTACCTCGGCAGCACAGCTTCAACCAACGAAGCTCCCATCAGCCACTCTTGCTCTCCCGAATGAACTCTAATGGCAGCAATTCGGGTTGCGACGTACGGCACCCACTCATCCCGAACGGATACTTAACTCGCCAGCATAGCTACAGCGAGCAGCCAGAAGTCCACCGTGGAGCTATTGTTCGTCGGACAGCCTCGCTCAAGCCTGACGTCCCACCCAAACCTCTGTTCATCCCTGCCAGCTCACCTGTCAACCAGGCAGGGAAGTTCAACTACTGAACATCAGAGAAGAAAAGCCTGTTTTTATTTTCGTGAAAGGCTACTCGACCTCTCAGAACTGATTGTGATTGGCTGGACGAAAAAACTTGCCTTtataggagaaaaaaaacaatggagaATGGCTGCCAGTGTTGTCGACTTTGCATTTGAACTATGACctgtttttctctgttttttgAATATTTGTACCATATTGGTATTGCTCAGCTATTGGCCATTAGGAAGGGAGGAGTTACAAGAGTCCACCTAGATTTAGGCTGCCGCATTGATAAGCGTGTGGCTTTACAGTGTTACTTTGGACTGTTTAAACAGGCGTCACTGATCCTAAATTCTGGACTTGAACTTTTATCGAAACAAGTGTATACACCTTGTTTGATAACCTGATCTTTCTTGCTTTGGCTTAACTATTCTGTTGACGTAGAGTTGATGAACTGTGCTGATCCCAATTAGAAATcctgtatatatgcatgtgtgtgtgcgtgtgtgtgtgtatatatatatatatattaaaaatatatatgtatgtgtgtgtatatacatatacatgcccAGTGTATGTATCTAGATTACCGAAATGGTTTAGGTCCCTCAAGAAGTTTTTTCACTTTATTATAAAAGCAGTTGAAATGCCCACACAAACTCAAGAGATCGCTGTAAAAACCGTAAGCAATAATCATCCACCCATCCTGTCCACTTTAGTGTAATGCAGGTAGAAAAACTCAAACTCAGTTCAAATTCACATGATTAAATGTGGCAAGAGAAACTGGTAAATCCGAATACCCGGCCACCAGTGAGGTGATGCGGACTTAGTGTTATGAAGGAGATGTATGTATAAACCTAAGAGGAATGTATTCGTTGTCCATACGCTGCAGAATCAGTGTGAGGTGCTCTAGTATTTACAATCCAAGTCAGTTAATGGGTGAAAGTGATTTCAAATTTGATCTCTTACATCAGGGGTGCCCAACCCCGGCCCTGgggggccggtgttctgcaaagtttagttccaaccccaatcagacacacctgggttagccaatcaagcttttactaggctttctagaagcatccttccaggtgtgttgagacaagttgaagctaaaatctgcagtgctccggccctccaggactgagtttggacacccttgtctTACATCATTGAATGCCATGTCCTAACTAGGTGTGATAAAGCATTTATCTTCTGTGTAAATGAGTTGTTTTCATCTTTAACCACCCCTGAcctctttcttttttcattataTATTGCCCCGCCTACAGTGAAATGTGATTGGTCTAAACATCTGATCATATACCTTAACTGTGTATTAAACACCTGTTAATTGGTTCTGGATATATCAGTCCATGAAACACTTTAACAATGAAACTGGTCACACCTGGATAGGACACGGTGCAAGTGTCAAAACGGTTTCTTTCTTTAGTCCTGAGTTATGCCTATATTATGTTAAAATAGAGAATTGTAACGATATTAACACACAACTGTTTTGTGTAAATAGCTGAACGATAACTAGCCaaattttaattgtttgtgtAAATTTGTGCCTTATTTAATATGATGTGTTAATGGGGGGGTGGCGGCAGAGTGTGAGAGGGGACATAGGAATAGGGCAAAAAGGCCGTCATTGtactttcatttttaatatttgtaatttttttttacttggttgTCTGTATGTGTCATAACTGTTGTAGATATATATTTCTAGATACTTTTGATATCCCCAGGCTGAGTGAGGCTTTTGCATACATGGATCaacattaaaaatgcaattaaagtttttttatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatttatctatctatctatctatctctctatctatctgtctgtctatctgtctgtctatctatccgtctttctacccatccttctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatcatgttttctttacatttatattgcTTTCATGTTAAATTCTATTAATCACTTCTATAACATTTGTTTTCTCTTTCTATTTTCTTGCTTTCTCGTTGAACTCAGCCCTGCTCTCACAGAACTGACAGGTTTGTTCTGAAATGTATGAAGTAAGATGTAAGATACGCGAACTTCTGCAGTGCAGCGTGTCTTCTGATCTTATGTTTAATGGCGGAAGCAAGACTTCTTAGGGCTTGCACTATGTTTGGAGGAGAGACTTCTGCGTGcttgcgtgagtgtgtgtgtgtgtgtgtatgtgagtgtgtgtgcgcgtgtttcaATGAGACCATATCAATTGGCTGTAGTTCAAACACGTACCTCCCTTTGCCTTTTCCCAGTACTTCAGCCTGGCAGAGCAACTCGGAACAGTTCCTCTGCTCAAAGTCATCTTCATCTTTTTCTTCAGTCTGTCTTAAGGCTCTATGATGTGTCGGCTTTTGCATAAATTCTTGGTGCTGGCCTGAAATACAGTTTTCATCATGTACACTTGAATGAACCTTTCAAATTGGCTGCCTGTAACTGTGTGCTCTGTTGCCCCTCACAAAAACCAAATGCAATGTCACATTTGAAAAGACGGCTAGCGCATCATATGCATCCCAGGTGGAAAAACGGACTGAGGGTTGAATCCCTGCACAGTACTCGATGGATATCCTGAACGAGTGCAGAGGCTGGTGTAGTTTCTTTGAATTTCTATAGATATAATGATGGAAAGGGAACTGCGTGTGTCTGTTTTATCTGCTTTAACCATTGAGGTCTCTGTTATTGCACAGTGTAAATACAGTCCTGGAGTTTCCCAGGATTCAGTGCTCTGTTATGATTACTATTGGGCAAAGCCCCATGGATTCTCCACCTCTGCTTTTATGGAATACTGTTGTATTTTCCTTATAACAGAAATAAATGAGAGATCATAACATGCATATTGTTTTGTTGATTGTGTCGTTTGATTGACCTACAAATTATagggaacactttagtttaaggacCAGTTCTTTTTATTAACTAGTGGCCTGTTACCTGCCTGTTAATAAAATATGGGCTGTTTATTTGAACATGTAAAGTTCATATTCTGCATGGTCTTATAATATGTCTCTAACTACTACCTTAAAGGTGCTTTATGTTTTTGACTCcatataaatactataatatgtttgcagttattaaagaaacatgccaagtgaacatacttgtttatctgaaaaaaattgctgaagtcaaatattctgctttgaaaaatgtGTTTACCGTGcctgaatgtctgtctttgttttggtaattgTAACCAGCGCCATGCCAGTTTGTCTAGTTATATTTTAGCAcctcgggttgccttggtggaaaaccgcgt
>TCONS_00019938
CACAATGTAATAGAGTTTTAGCGCAGTCTTGCTTTTTCAAAGGCGTGTGTCAACTCTGTGTGCCAAGGGCTGCTCCGCTTTTACCAATGCGATTAATGAAGACAACGAACCAATTGAGGGAACACTAAACTAATAACCTTCCGTTTCGTTTCGTCTGTTGTTTTTAATACGGACGAGCTTCGTCTCTGCAAGGAATCAACCCTCTGCACGAGCACAAAGGAAAATTTAAAAGGCAAGCAAAGGTCGGTTGTGGAATGTCACAGCTTTCTCAAACATCCAGACCTTTATCCTTGCTCGTCTGCAGTCCTGCTGTCTGATTGGATCATCCTTCAAGGTAAGAACCAATGGGAAGAAGCTTACTTAACTGGTGAAAAGCAGCTTTATTCTGTtttctcctcatgtcctgctctTTTGATGAAATTTGCTCAGTGAAGTCAAGTTGAGCCTCTCTGAAGGACAACGACTTGATTTGAGAGAAAATTGAGATATCATCCGACTTCATTATTTTGACTGGACTATTCACCCGAGGCCATCACGTTGGGGACAACGTCTGTCGATTTTTAGAAGAAtacaaatatgatttaaaaaaaaaaaaaaaaaacttctgacaGTCTGTCACACAATCTGTTTAAGTCAAGTCTCACTGCAAGTAGGCGACAAACAATTGAAAAGTATCAGATTTGGAGAAAGGAAGGCAGATTTTTCCAATGCAACAAAACAGAAACAAGCTGACAATGGAGATCACTTAGGAAAGGACAAAACAGATGAGACTTGATGTGAAGAgtgtggaac
>TCONS_00021964
CACAATGTAATAGAGTTTTAGCGCAGTCTTGCTTTTTCAAAGGCGTGTGTCAACTCTGTGTGCCAAGGGCTGCTCCGCTTTTACCAATGCGATTAATGAAGACAACGAACCAATTGAGGGAACACTAAACTAATAACCTTCCGTTTCGTTTCGTCTGTTGTTTTTAATACGGACGAGCTTCGTCTCTGCAAGGAATCAACCCTCTGCACGAGCACAAAGGAAAATTTAAAAGGCAAGCAAAGGTCGGTTGTGGAATGTCACAGCTTTCTCAAACATCCAGACCTTTATCCTTGCTCGTCTGCAGTCCTGCTGTCTGATTGGATCATCCTTCAAGGCCCTGCAGCTGTGCACCGAGCTCAG
>TCONS_00021965
CACAATGTAATAGAGTTTTAGCGCAGTCTTGCTTTTTCAAAGGCGTGTGTCAACTCTGTGTGCCAAGGGCTGCTCCGCTTTTACCAATGCGATTAATGAAGACAACGAACCAATTGAGGGAACACTAAACTAATAACCTTCCGTTTCGTTTCGTCTGTTGTTTTTAATACGGACGAGCTTCGTCTCTGCAAGGAATCAACCCTCTGCACGAGCACAAAGGAAAATTTAAAAGGCAAGCAAAGGTCGGTTGTGGAATGTCACAGCTTTCTCAAACATCCAGACCTTTATCCTTGCTCGTCTGCAGTCCTGCTGTCTGATTGGATCATCCTTCAAGTGATTCGGGTTTCCTGCCTGCCATCATGGACACGC
>TCONS_00019940
tctttctcaggaTCTAGAGTGAAAATCTCTTTTTTTGTTCCTGAAGTGTTGCCCGCCATCGACTCTTCGTGGACAACAGCGTTTCCACCACTGCTCATCTCCTGAAAGGATAACAgtggtCTTCAGTCTACTCTGGGTCATGCTGTGTGGCTGAATTCTATGCTGTAGCTGAAATGAGGTTGGTGATTTTGGGGTCGCGGCCCCTTTTGGCCTTGACCCTCATGCTCACCCTCACCTGCCTAAAGCATCTGTGCCATGGTGCAACACCCTTTCCTCAGGATCTGGAACCCATCAGGACCGTTGGTAGTGAACACACCTACCTGTACCCCAGTTTCCAGGGGAACATGTCAGATAACGACACCGCCAGACTGGGCCTGGATTTTCAGAGGATGCTGCGGATTAACCACATGGTCTACATCGCTGCAAGAGATCACGTTTTTGCCATTAACCTCAGTGCTTCATTGGAGCGCATCGTCCCCCAACAGAAACTGACATGGAAGACAAAAGATGTGGAGAAATGCACAGTCAGGGGGAAAAACAGCGATGAGTGTTACAACTACATCAAAGTGCTGGTGCCACGTAACGATGAAACCCTCTTTGCGTGCGGAACCAATGCGTTCAACCCCACCTGTCGCAACTACAAGATGTCATCTCTAGAGCAGGACGGAGAAGAGGTGATCGGTCAAGCCCGCTGCCCTTTCGAGTCCCGCCAGTCCAACGTTGGCCTGTTTGCCGGCGGTGACTTCTACTCAGCCACGATGACTGATTTTCTAGCGAGCGATGCAGTGATTTACCGAAGTTTAGGAGAAAGCAGTCCTGTCCTGCGTACTGTAAAATATGACTCCAAGTGGCTGCGAGaaCCGCATTTTCTTCATGCCATCGAGTATGGGAACTACGTGTACTTCTTCCTCAGTGAGATTGCAGTGGAGTATACCACCCTTGGCAAGGTGGTGTTTTCCCGAGTGGCTCGCGTGTGTAAGAATGATAACGGCGGTTCTCCACGGGTTCTAGAAAGATACTGGACGTCTTTCCTGAAGGCCCGGTTAAACTGCTCAGTTCCTGGTGACTCTTTTTTCTACTTTGATGTTCTTCAGTCATTAACAAACGTCATGCAGATCAACCACAGGCCTGCAGTGTTGGGCGTCTTTACCACTCAAGCCAACAGCATCACTGGTTCTGCTGTATGTGCATTTTACATGGATGACATAGAGAAAGTGTTCAATGGGAAGTTTAAGGAGCAGCGAAACAGCGAGTCCGCCTGGACACCAGTTCCTGATGAAGCGGTGCCCAAACCCCGgCCAGGGTCGTGTGCTGGTGATGGCCCTGCTGCTGGTTACAAGTCCTCCACAAATTTCCCTGATGAGACTCTTACCTTCATTAAGTCTTATCCACTAATGGACGAGGCTGTGCCGTCTGTCAACAACCGACCCTGCTTCACACGAACCACCAGCAGGTTCAAGCTGACCCAGATTGCAGTGGACACGGCAGCTGGCCCATATAAGAACTACACTGTCGTGTTTCTGGGGTCAGAAAATGGACATGTCCTGAAGGTTTTAGCTAGCATGCATCCAAACTCCTCGTACAGCACTCAGGTTTTGGAGGACATCGATGTTTACAACCCTAACAAATGTAATGTGCGTGGGGAGGACCGGAGGATTCTGGGATTGGAGCTGGATAAAGACCATCATGCCCTGTTTGTGGCCTTTACAGGTTGCGTAATCCGTGTTCCACTCAGTCGCTGTTCGGATTATGGAATCTGCAGAAACTGCCTGTCCTCACGAGACCCCTATTGCATCTGGCTGAGCGCAGGGAACTGTGCCACGGTGGCGCCGGGATTCAAGTCTGGATTCGAGCAGTATGTAGAGAGTGGATATCCTCAGTATCCAGACAGCTGTCACGATGTCTTGGCAACGACTCGAAAGCAGAACCCTGCAGTGGACTCTGCATACGGAAAGACCTCACCCACAAGTGCCAGCACAACCAATCAGGGGCCAGCTGGTGCCCCTGAGACAGGTACCCACCCCGAGGAGGGGAGGCGGGGAGGGCAGGGGTCTCCTGACTTGGAGCCCGGCAGTGTGGAGATGGAGGG
>TCONS_00019941
CAACAGCGTTTCCACCACTGCTCATCTCCTGAAAGGATAACAgtggtCTTCAGTCTACTCTGGGTCATGCTGTGTGGCTGAATTCTATGCTGTAGCTGAAATGAGGTTGGTGATTTTGGGGTCGCGGCCCCTTTTGGCCTTGACCCTCATGCTCACCCTCACCTGCCTAAAGCATCTGTGCCATGGTGCAACACCCTTTCCTCAGGATCTGGAACCCATCAGGACCGTTGGTAGTGAACACACCTACCTGTACCCCAGTTTCCAGGGGAACATGTCAGATAACGACACCGCCAGACTGGGCCTGGATTTTCAGAGGATGCTGCGGATTAACCACATGGTCTACATCGCTGCAAGAGATCACGTTTTTGCCATTAACCTCAGTGCTTCATTGGAGCGCATCGTCCCCCAACAGAAACTGACATGGAAGACAAAAGATGTGGAGAAATGCACAGTCAGGGGGAAAAACAGCGATGAGTGTTACAACTACATCAAAGTGCTGGTGCCACGTAACGATGAAACCCTCTTTGCGTGCGGAACCAATGCGTTCAACCCCACCTGTCGCAACTACAAGATGTCATCTCTAGAGCAGGACGGAGAAGAGGTGATCGGTCAAGCCCGCTGCCCTTTCGAGTCCCGCCAGTCCAACGTTGGCCTGTTTGCCGGCGGTGACTTCTACTCAGCCACGATGACTGATTTTCTAGCGAGCGATGCAGTGATTTACCGAAGTTTAGGAGAAAGCAGTCCTGTCCTGCGTACTGTAAAATATGACTCCAAGTGGCTGCGAGaaCCGCATTTTCTTCATGCCATCGAGTATGGGAACTACGTGTACTTCTTCCTCAGTGAGATTGCAGTGGAGTATACCACCCTTGGCAAGGTGGTGTTTTCCCGAGTGGCTCGCGTGTGTAAGAATGATAACGGCGGTTCTCCACGGGTTCTAGAAAGATACTGGACGTCTTTCCTGAAGGCCCGGTTAAACTGCTCAGTTCCTGGTGACTCTTTTTTCTACTTTGATGTTCTTCAGTCATTAACAAACGTCATGCAGATCAACCACAGGCCTGCAGTGTTGGGCGTCTTTACCACTCAAGCCAACAGCATCACTGGTTCTGCTGTATGTGCATTTTACATGGATGACATAGAGAAAGTGTTCAATGGGAAGTTTAAGGAGCAGCGAAACAGCGAGTCCGCCTGGACACCAGTTCCTGATGAAGCGGTGCCCAAACCCCGgCCAGGGTCGTGTGCTGGTGATGGCCCTGCTGCTGGTTACAAGTCCTCCACAAATTTCCCTGATGAGACTCTTACCTTCATTAAGTCTTATCCACTAATGGACGAGGCTGTGCCGTCTGTCAACAACCGACCCTGCTTCACACGAACCACCAGCAGGTTCAAGCTGACCCAGATTGCAGTGGACACGGCAGCTGGCCCATATAAGAACTACACTGTCGTGTTTCTGGGGTCAGAAAATGGACATGTCCTGAAGGTTTTAGCTAGCATGCATCCAAACTCCTCGTACAGCACTCAGGTTTTGGAGGACATCGATGTTTACAACCCTAACAAATGTAATGTGCGTGGGGAGGACCGGAGGATTCTGGGATTGGAGCTGGATAAAGACCATCATGCCCTGTTTGTGGCCTTTACAGGTTGCGTAATCCGTGTTCCACTCAGTCGCTGTTCGGATTATGGAATCTGCAGAAAgaGCTGCCTGTCCTCACGAGACCCCTATTGCATCTGGCTGAGCGCAGGGAACTGTGCCACGGTGGCGCCGGGATTCAAGTCTGGATTCGAGCAGTATGTAGAGAGTGGATATCCTCAGTATCCAGACAGCTGTCACGATGTCTTGGCAACGACTCGAAAGCAGAACCCTGCAGTGGACTCTGCATACGGAAAGACCTCACCCACAAGTGCCAGCACAACCAATCAGGGGCCAGCTGGTGCCCCTGAGACAGGTACCCACCCCGAGGAGGGGAGGCGGGGAGGGCAGGGGTCTCCTGACTTGGAGCCCGGCAGTGTGGAGATGGAGGGAGTGCGCCGACCCCCTGAGGTTGATAAGTCCAACCACAGTGTTCACTACACCCTGCTCATAGCGTGTGTCCTGGTGGCGTTCGTCCTGGGAGCTTTCCTCTCCGGATTCCTTGTTTCCTGTTACTGCAACCACAACGTTAACAAGACGAAAAGGCTGTCGAAAGATCCAGAAGCGCCGATCCCACATGCTCTCTCCCTGCGCAGCTTGGCCAAGCTCAATGGCTTGCTGGAGAGCCAAAACAAGGACGAGAAACTAGAGGTGTCCTCACCCAAACTCTACAACTCATTCTTTGCCAATGGGAAAGAGCAAGCACATCGCAGGAATGCCCACCATGCTGCCATGACAGAGCTCATTCACCCACATCATCACCACTCTGCTGAGCTCTCCGGCCTTCCCACACCAGATTCGACACCAGAGCTCCCAATCAAGAGCATGAAGGCCTTTAAGAACCAGTGGGAGAAGAACCAAAACTGCAATAACGCTAAAGAACCCAAGTCCCACAATATGGGAGCATCACGGCCAACAAGTGCAATGCAGCATCAGATGTTCCCTTTCTCTCATGGGCTGACTAATGGACAGGTACTAGGTGGCTCCGTACACATGGACGAACGGAAAGTCCACAACACGGAGCGTGTGGTAAGCCAACCGTATCACTGCTACCCGCACAAGATTGTGGACGTCACCTCACTTGACGAGCTTTTAAAACATATTCATGAAATCAACGTGGCCACAGGCAAGAGTCCCAGCGTCCTCACCTCGTCCATGTCAGCCAACGCCGGTCAGATGGCGTTCGCCAATCGCGTACAGCCACACATCCCAGAAACAGAGTCCGCACCATACTACAGTTCCTCTACACTTCCTCGGGACAGTCTCACTCGTCGCATGGACATCCCACCAGAAATTCCTCCCCATCATCAGTCCACCCTAGAGAGAGTGTCCCGTCACCCAGCTCAACGCCACTCTCTGATAACCACCCCCAAGATGCCCAGTGGGGGTGTAGTACCTCGGCAGCACAGCTTCAACCAACGAAGCTCCCATCAGCCACTCTTGCTCTCCCGAATGAACTCTAATGGCAGCAATTCGGGTTGCGACGTACGGCACCCACTCATCCCGAACGGATACTTAACTCGCCAGCATAGCTACAGCGAGCAGCCAGAAGTCCACCGTGGAGCTATTGTTCGTCGGACAGCCTCGCTCAAGCCTGACGTCCCACCCAAACCTCTGTTCATCCCTGCCAGCTCACCTGTCAACCAGGCAGGGAAGTTCAACTACTGA

Function

symbol description
sema6e Enables chemorepellent activity. Predicted to be involved in several processes, including generation of neurons; neural crest cell migration; and semaphorin-plexin signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Predicted to be integral component of plasma membrane. Is expressed in brain; lens; and solid lens vesicle. Orthologous to human SEMA6C (semaphorin 6C).

GO:

id name namespace
GO:0001755 neural crest cell migration biological_process
GO:0050919 negative chemotaxis biological_process
GO:0048843 negative regulation of axon extension involved in axon guidance biological_process
GO:0007411 axon guidance biological_process
GO:0030335 positive regulation of cell migration biological_process
GO:0071526 semaphorin-plexin signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0005615 extracellular space cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0045499 chemorepellent activity molecular_function
GO:0030215 semaphorin receptor binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-119 Enables chemorepellent activity. Predicted to be involved in several processes, including generation of neurons; neural crest cell migration; and semaphorin-plexin signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Predicted to be integral component of plasma membrane. Is expressed in brain; lens; and solid lens vesicle. Orthologous to human SEMA6C (semaphorin 6C).

Ensembl:

ensembl_id ENSDARG00000000189 ENSDARG00000093232

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019937 False 7420 mRNA 0.44 19 30002605 30271444
TCONS_00019938 False 792 processed_transcript 0.41 2 30002752 30036693
TCONS_00021964 False 360 lncRNA 0.46 3 30002752 30039724
TCONS_00021965 False 369 lncRNA 0.46 3 30002752 30117984
TCONS_00019940 False 2089 mRNA 0.52 18 30117798 30245831
TCONS_00019941 True 3295 mRNA 0.53 19 30117871 30267666

Neighbor

gene id symbol gene type direction distance location
XLOC_010019 AL928927.1 coding upstream 93635 29903644 ~ 29908970 (+)
XLOC_010018 NA coding upstream 189353 29721627 ~ 29813252 (+)
XLOC_010017 lysmd1 coding upstream 305816 29690708 ~ 29696789 (+)
XLOC_010016 tmod4 coding upstream 317747 29650698 ~ 29684858 (+)
XLOC_010015 vps72b coding upstream 354867 29630965 ~ 29647738 (+)
XLOC_010022 LO017848.1 coding downstream 30095 30301539 ~ 30306358 (+)
XLOC_010023 tmem79b coding downstream 44733 30316177 ~ 30326055 (+)
XLOC_010024 NA coding downstream 58419 30329863 ~ 30330881 (+)
XLOC_010025 pear1 coding downstream 166597 30438041 ~ 30520157 (+)
XLOC_010026 mc2r coding downstream 304457 30575901 ~ 30577136 (+)
XLOC_010014 NA non-coding upstream 401937 29591119 ~ 29600668 (+)
XLOC_010006 NA non-coding upstream 751757 29245880 ~ 29250848 (+)
XLOC_010005 NA non-coding upstream 771758 29211362 ~ 29230847 (+)
XLOC_010029 BX510336.1 non-coding downstream 699057 30970501 ~ 30971157 (+)
XLOC_010030 NA non-coding downstream 819554 31090998 ~ 31094580 (+)
XLOC_010031 NA non-coding downstream 850312 31121756 ~ 31135431 (+)
XLOC_010035 CR855311.5 non-coding downstream 1363026 31634470 ~ 31634595 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_08340304_08385380 SEMA6E, SEMA6C coding CI01000027 null 8340304 ~ 8385380 (+)
bowfin (Amia calva) AMCG00012462 NA coding CM030138.1 CM030138.1 18615913 ~ 18651892 (-)