G240154


Basic Information

Item Value
gene id G240154
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 5232814 ~ 5233313 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU272487
TGTTTCTCCTTGAGTGCCAACTGTGTCTTCAACCTCTCCACAAGGTTCTTCATGGTGTTGGATGGTGACCTGACATTGGCCTCTTTCTGGGCCTCTAGCTCCGTACGGAGGTAATGCAGCTCTTTCTCCATCTGAACGAGCTGAGCTCTCAGCTCTTCTGCCTCCTGGGACAGACCCTTCATTTGGGCAGCATGTCTCTCCTCCAGTCTGGCTGTTTCAGCAGCGTGCTCCATGGCTTGTGCTGCTGCCAGCTGTCTCTGTTGGTCCAGCTCTGCAATGACCACCTTCAGCTTGTGTGTCAGTGAGGAGAGTGAATTGTCCTGCTCAGCCACCGTCTGCTCCATTTCTGCCAACCGCACCAAGTGCTTATTGGTTGGTACAGTGATGGTGGGTTTCTTCATTAGCTCCTAGAGAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272487 True 418 lncRNA 0.53 2 5232814 5233313

Neighbor

gene id symbol gene type direction distance location
CI01000055_05216403_05221104 NA coding upstream 11644 5216200 ~ 5221170 (+)
CI01000055_05212820_05215358 BORCS5 coding upstream 16671 5211471 ~ 5216143 (+)
CI01000055_05183333_05195895 BTBD10B, BTBD10, BTBD10A coding upstream 36244 5183333 ~ 5196570 (+)
CI01000055_05176060_05176484 NA coding upstream 56181 5175772 ~ 5176633 (+)
CI01000055_05163240_05166231 PIGY, PYURF coding upstream 66186 5162990 ~ 5166647 (+)
CI01000055_05263543_05300250 TMTC3 coding downstream 29934 5263247 ~ 5300649 (+)
CI01000055_05517350_05524400 NA coding downstream 284037 5517350 ~ 5524620 (+)
CI01000055_05565166_05572215 TES coding downstream 331853 5565166 ~ 5572457 (+)
CI01000055_05608414_05611862 CAV2 coding downstream 374193 5607506 ~ 5613775 (+)
CI01000055_05614889_05616453 NA coding downstream 380752 5614065 ~ 5617591 (+)
G240143 NA non-coding upstream 63485 5168979 ~ 5169329 (+)
G240071 NA non-coding upstream 73799 5158732 ~ 5159015 (+)
G240068 NA non-coding upstream 74537 5157917 ~ 5158277 (+)
G240116 NA non-coding upstream 150068 5082532 ~ 5082746 (+)
G240163 NA non-coding downstream 13321 5246634 ~ 5251328 (+)
G240171 NA non-coding downstream 83973 5317286 ~ 5317495 (+)
G240176 NA non-coding downstream 93140 5326453 ~ 5327130 (+)
G240177 NA non-coding downstream 94071 5327384 ~ 5327704 (+)
G240178 NA non-coding downstream 94615 5327928 ~ 5328223 (+)
CI01000055_04265119_04272728 NA other upstream 960099 4265119 ~ 4273913 (+)
G239755 NA other upstream 977722 4254210 ~ 4255092 (+)
G239761 NA other upstream 1019412 4162250 ~ 4213402 (+)
CI01000055_02542526_02542861 NA other upstream 2688696 2542216 ~ 2544118 (+)
G240099 NA other downstream 303205 5525472 ~ 5544153 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other downstream 853512 6087034 ~ 6088759 (+)
G240344 NA other downstream 930547 6163860 ~ 6164011 (+)
CI01000055_06310117_06334586 GRAMD4B, GRAMD4 other downstream 1101011 6310117 ~ 6334801 (+)

Expression


Co-expression Network