Item | Value |
---|---|
gene id | G240171 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000055 |
NCBI id | null |
chromosome length | 6774723 |
location | 5317286 ~ 5317495 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU272516 | True | 210 | lncRNA | 0.31 | 1 | 5317286 | 5317495 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000055_05263543_05300250 | TMTC3 | coding | upstream | 16637 | 5263247 ~ 5300649 (+) |
CI01000055_05216403_05221104 | NA | coding | upstream | 96116 | 5216200 ~ 5221170 (+) |
CI01000055_05212820_05215358 | BORCS5 | coding | upstream | 101143 | 5211471 ~ 5216143 (+) |
CI01000055_05183333_05195895 | BTBD10B, BTBD10, BTBD10A | coding | upstream | 120716 | 5183333 ~ 5196570 (+) |
CI01000055_05176060_05176484 | NA | coding | upstream | 140653 | 5175772 ~ 5176633 (+) |
CI01000055_05517350_05524400 | NA | coding | downstream | 199855 | 5517350 ~ 5524620 (+) |
CI01000055_05565166_05572215 | TES | coding | downstream | 247671 | 5565166 ~ 5572457 (+) |
CI01000055_05608414_05611862 | CAV2 | coding | downstream | 290011 | 5607506 ~ 5613775 (+) |
CI01000055_05614889_05616453 | NA | coding | downstream | 296570 | 5614065 ~ 5617591 (+) |
CI01000055_05630944_05688603 | MET | coding | downstream | 313449 | 5630944 ~ 5688603 (+) |
G240163 | NA | non-coding | upstream | 65958 | 5246634 ~ 5251328 (+) |
G240154 | NA | non-coding | upstream | 83973 | 5232814 ~ 5233313 (+) |
G240143 | NA | non-coding | upstream | 147957 | 5168979 ~ 5169329 (+) |
G240071 | NA | non-coding | upstream | 158271 | 5158732 ~ 5159015 (+) |
G240176 | NA | non-coding | downstream | 8958 | 5326453 ~ 5327130 (+) |
G240177 | NA | non-coding | downstream | 9889 | 5327384 ~ 5327704 (+) |
G240178 | NA | non-coding | downstream | 10433 | 5327928 ~ 5328223 (+) |
G240179 | NA | non-coding | downstream | 10930 | 5328425 ~ 5328638 (+) |
G240180 | NA | non-coding | downstream | 14436 | 5331931 ~ 5332435 (+) |
CI01000055_05163240_05166231 | PIGY, PYURF | other | upstream | 150639 | 5162990 ~ 5166647 (+) |
CI01000055_04265119_04272728 | NA | other | upstream | 1044571 | 4265119 ~ 4273913 (+) |
G239755 | NA | other | upstream | 1062194 | 4254210 ~ 4255092 (+) |
G239761 | NA | other | upstream | 1103884 | 4162250 ~ 4213402 (+) |
CI01000055_02542526_02542861 | NA | other | upstream | 2773168 | 2542216 ~ 2544118 (+) |
G240099 | NA | other | downstream | 219023 | 5525472 ~ 5544153 (+) |
CI01000055_06087070_06088629 | ETFRF1, LYRM5, LYRM5B | other | downstream | 769330 | 6087034 ~ 6088759 (+) |
G240344 | NA | other | downstream | 846365 | 6163860 ~ 6164011 (+) |
CI01000055_06310117_06334586 | GRAMD4B, GRAMD4 | other | downstream | 1016829 | 6310117 ~ 6334801 (+) |