Item | Value |
---|---|
gene id | G240199 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000055 |
NCBI id | null |
chromosome length | 6774723 |
location | 5411507 ~ 5411741 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU272544 | True | 235 | lncRNA | 0.33 | 1 | 5411507 | 5411741 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000055_05263543_05300250 | TMTC3 | coding | upstream | 110858 | 5263247 ~ 5300649 (+) |
CI01000055_05216403_05221104 | NA | coding | upstream | 190337 | 5216200 ~ 5221170 (+) |
CI01000055_05212820_05215358 | BORCS5 | coding | upstream | 195364 | 5211471 ~ 5216143 (+) |
CI01000055_05183333_05195895 | BTBD10B, BTBD10, BTBD10A | coding | upstream | 214937 | 5183333 ~ 5196570 (+) |
CI01000055_05176060_05176484 | NA | coding | upstream | 234874 | 5175772 ~ 5176633 (+) |
CI01000055_05517350_05524400 | NA | coding | downstream | 105609 | 5517350 ~ 5524620 (+) |
CI01000055_05565166_05572215 | TES | coding | downstream | 153425 | 5565166 ~ 5572457 (+) |
CI01000055_05608414_05611862 | CAV2 | coding | downstream | 195765 | 5607506 ~ 5613775 (+) |
CI01000055_05614889_05616453 | NA | coding | downstream | 202324 | 5614065 ~ 5617591 (+) |
CI01000055_05630944_05688603 | MET | coding | downstream | 219203 | 5630944 ~ 5688603 (+) |
G240188 | NA | non-coding | upstream | 49399 | 5361861 ~ 5362108 (+) |
G240183 | NA | non-coding | upstream | 66521 | 5343565 ~ 5344986 (+) |
G240182 | NA | non-coding | upstream | 77763 | 5333505 ~ 5333744 (+) |
G240181 | NA | non-coding | upstream | 78642 | 5332556 ~ 5332865 (+) |
G240180 | NA | non-coding | upstream | 79072 | 5331931 ~ 5332435 (+) |
G240201 | NA | non-coding | downstream | 53461 | 5465202 ~ 5465455 (+) |
G240202 | NA | non-coding | downstream | 55344 | 5467085 ~ 5467298 (+) |
G240207 | NA | non-coding | downstream | 64313 | 5476054 ~ 5514756 (+) |
G240099 | NA | non-coding | downstream | 113731 | 5525472 ~ 5544153 (+) |
G240114 | NA | non-coding | downstream | 125716 | 5537457 ~ 5540432 (+) |
CI01000055_05163240_05166231 | PIGY, PYURF | other | upstream | 244860 | 5162990 ~ 5166647 (+) |
CI01000055_04265119_04272728 | NA | other | upstream | 1138792 | 4265119 ~ 4273913 (+) |
G239755 | NA | other | upstream | 1156415 | 4254210 ~ 4255092 (+) |
G239761 | NA | other | upstream | 1198105 | 4162250 ~ 4213402 (+) |
CI01000055_02542526_02542861 | NA | other | upstream | 2867389 | 2542216 ~ 2544118 (+) |
CI01000055_06087070_06088629 | ETFRF1, LYRM5, LYRM5B | other | downstream | 675084 | 6087034 ~ 6088759 (+) |
G240344 | NA | other | downstream | 752119 | 6163860 ~ 6164011 (+) |
CI01000055_06310117_06334586 | GRAMD4B, GRAMD4 | other | downstream | 922583 | 6310117 ~ 6334801 (+) |