Gene
RNA
| Item | Value |
|---|---|
| gene id | G241522 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 5465934 ~ 5466256 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU274084 | True | 323 | lncRNA | 0.36 | 1 | 5465934 | 5466256 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_05450546_05453791 | DUS6, DUSP6 | coding | downstream | 11409 | 5450179 ~ 5454525 (-) |
| CI01000055_05366677_05395359 | NA | coding | downstream | 70575 | 5365451 ~ 5395359 (-) |
| CI01000055_05338403_05341971 | NA | coding | downstream | 123963 | 5338403 ~ 5341971 (-) |
| CI01000055_05221493_05259302 | CEP290 | coding | downstream | 206632 | 5221184 ~ 5259302 (-) |
| CI01000055_05199232_05206842 | ARNTL, ARNTL1A | coding | downstream | 259092 | 5198626 ~ 5206842 (-) |
| CI01000055_05476481_05514757 | POC1B | coding | upstream | 10225 | 5476481 ~ 5514757 (-) |
| CI01000055_05527409_05532734 | CPA1 | coding | upstream | 60722 | 5526978 ~ 5532744 (-) |
| CI01000055_05536718_05540416 | CBPA1, CPA1.L, CPA1, CPA5 | coding | upstream | 70422 | 5536678 ~ 5540426 (-) |
| CI01000055_05543598_05551750 | NA | coding | upstream | 77309 | 5543565 ~ 5553012 (-) |
| CI01000055_05575276_05587897 | NA | coding | upstream | 108796 | 5575052 ~ 5588039 (-) |
| G241521 | NA | non-coding | downstream | 7237 | 5458460 ~ 5458697 (-) |
| G241517 | NA | non-coding | downstream | 18249 | 5447290 ~ 5447685 (-) |
| G241515 | NA | non-coding | downstream | 21805 | 5443826 ~ 5444129 (-) |
| G241510 | NA | non-coding | downstream | 31355 | 5434234 ~ 5434579 (-) |
| G241509 | NA | non-coding | downstream | 35288 | 5430426 ~ 5430646 (-) |
| G241523 | NA | non-coding | upstream | 54 | 5466310 ~ 5466565 (-) |
| G241548 | NA | non-coding | upstream | 107517 | 5573773 ~ 5574056 (-) |
| G241551 | NA | non-coding | upstream | 112494 | 5578750 ~ 5580175 (-) |
| G241552 | NA | non-coding | upstream | 115407 | 5581663 ~ 5581874 (-) |
| G241553 | NA | non-coding | upstream | 115825 | 5582081 ~ 5582297 (-) |
| CI01000055_04744063_04763284 | FAM19A5, FAM19A5B | other | downstream | 685666 | 4743706 ~ 4764067 (-) |
| CI01000055_03918168_03965674 | TCF7L2 | other | downstream | 1499914 | 3911302 ~ 3966460 (-) |
| G240975 | NA | other | downstream | 1731939 | 3717651 ~ 3733995 (-) |
| CI01000055_03616564_03618430 | NA | other | downstream | 1846290 | 3616555 ~ 3618430 (-) |
| G241542 | NA | other | upstream | 95087 | 5561343 ~ 5565783 (-) |
| G241646 | NA | other | upstream | 375938 | 5842194 ~ 5847572 (-) |
| CI01000055_06036788_06037622 | CARTPT, CART2 | other | upstream | 570328 | 6036472 ~ 6037728 (-) |
