Gene
RNA
| Item | Value |
|---|---|
| gene id | G241523 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 5466310 ~ 5466565 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU274085 | True | 256 | lncRNA | 0.32 | 1 | 5466310 | 5466565 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_05450546_05453791 | DUS6, DUSP6 | coding | downstream | 11785 | 5450179 ~ 5454525 (-) |
| CI01000055_05366677_05395359 | NA | coding | downstream | 70951 | 5365451 ~ 5395359 (-) |
| CI01000055_05338403_05341971 | NA | coding | downstream | 124339 | 5338403 ~ 5341971 (-) |
| CI01000055_05221493_05259302 | CEP290 | coding | downstream | 207008 | 5221184 ~ 5259302 (-) |
| CI01000055_05199232_05206842 | ARNTL, ARNTL1A | coding | downstream | 259468 | 5198626 ~ 5206842 (-) |
| CI01000055_05476481_05514757 | POC1B | coding | upstream | 9916 | 5476481 ~ 5514757 (-) |
| CI01000055_05527409_05532734 | CPA1 | coding | upstream | 60413 | 5526978 ~ 5532744 (-) |
| CI01000055_05536718_05540416 | CBPA1, CPA1.L, CPA1, CPA5 | coding | upstream | 70113 | 5536678 ~ 5540426 (-) |
| CI01000055_05543598_05551750 | NA | coding | upstream | 77000 | 5543565 ~ 5553012 (-) |
| CI01000055_05575276_05587897 | NA | coding | upstream | 108487 | 5575052 ~ 5588039 (-) |
| G241522 | NA | non-coding | downstream | 54 | 5465934 ~ 5466256 (-) |
| G241521 | NA | non-coding | downstream | 7613 | 5458460 ~ 5458697 (-) |
| G241517 | NA | non-coding | downstream | 18625 | 5447290 ~ 5447685 (-) |
| G241515 | NA | non-coding | downstream | 22181 | 5443826 ~ 5444129 (-) |
| G241510 | NA | non-coding | downstream | 31731 | 5434234 ~ 5434579 (-) |
| G241548 | NA | non-coding | upstream | 107208 | 5573773 ~ 5574056 (-) |
| G241551 | NA | non-coding | upstream | 112185 | 5578750 ~ 5580175 (-) |
| G241552 | NA | non-coding | upstream | 115098 | 5581663 ~ 5581874 (-) |
| G241553 | NA | non-coding | upstream | 115516 | 5582081 ~ 5582297 (-) |
| G241575 | NA | non-coding | upstream | 156252 | 5622817 ~ 5623346 (-) |
| CI01000055_04744063_04763284 | FAM19A5, FAM19A5B | other | downstream | 686042 | 4743706 ~ 4764067 (-) |
| CI01000055_03918168_03965674 | TCF7L2 | other | downstream | 1500290 | 3911302 ~ 3966460 (-) |
| G240975 | NA | other | downstream | 1732315 | 3717651 ~ 3733995 (-) |
| CI01000055_03616564_03618430 | NA | other | downstream | 1846666 | 3616555 ~ 3618430 (-) |
| G241542 | NA | other | upstream | 94778 | 5561343 ~ 5565783 (-) |
| G241646 | NA | other | upstream | 375629 | 5842194 ~ 5847572 (-) |
| CI01000055_06036788_06037622 | CARTPT, CART2 | other | upstream | 570019 | 6036472 ~ 6037728 (-) |
