Gene
RNA
| Item | Value |
|---|---|
| gene id | G241548 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 5573773 ~ 5574056 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU274114 | True | 284 | lncRNA | 0.50 | 1 | 5573773 | 5574056 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_05543598_05551750 | NA | coding | downstream | 20761 | 5543565 ~ 5553012 (-) |
| CI01000055_05536718_05540416 | CBPA1, CPA1.L, CPA1, CPA5 | coding | downstream | 33347 | 5536678 ~ 5540426 (-) |
| CI01000055_05527409_05532734 | CPA1 | coding | downstream | 41029 | 5526978 ~ 5532744 (-) |
| CI01000055_05476481_05514757 | POC1B | coding | downstream | 59016 | 5476481 ~ 5514757 (-) |
| CI01000055_05450546_05453791 | DUS6, DUSP6 | coding | downstream | 119248 | 5450179 ~ 5454525 (-) |
| CI01000055_05575276_05587897 | NA | coding | upstream | 996 | 5575052 ~ 5588039 (-) |
| CI01000055_05700508_05706528 | NA | coding | upstream | 126452 | 5700508 ~ 5707376 (-) |
| CI01000055_05711945_05712570 | NA | coding | upstream | 137465 | 5711521 ~ 5712668 (-) |
| CI01000055_05718689_05727278 | FBXL13 | coding | upstream | 144610 | 5718666 ~ 5727278 (-) |
| CI01000055_05750004_05751342 | NA | coding | upstream | 175948 | 5750004 ~ 5751677 (-) |
| G241523 | NA | non-coding | downstream | 107208 | 5466310 ~ 5466565 (-) |
| G241522 | NA | non-coding | downstream | 107517 | 5465934 ~ 5466256 (-) |
| G241521 | NA | non-coding | downstream | 115076 | 5458460 ~ 5458697 (-) |
| G241517 | NA | non-coding | downstream | 126088 | 5447290 ~ 5447685 (-) |
| G241515 | NA | non-coding | downstream | 129644 | 5443826 ~ 5444129 (-) |
| G241551 | NA | non-coding | upstream | 4694 | 5578750 ~ 5580175 (-) |
| G241552 | NA | non-coding | upstream | 7607 | 5581663 ~ 5581874 (-) |
| G241553 | NA | non-coding | upstream | 8025 | 5582081 ~ 5582297 (-) |
| G241575 | NA | non-coding | upstream | 48761 | 5622817 ~ 5623346 (-) |
| G241583 | NA | non-coding | upstream | 51492 | 5625548 ~ 5625784 (-) |
| G241542 | NA | other | downstream | 7990 | 5561343 ~ 5565783 (-) |
| CI01000055_05338403_05341971 | NA | other | downstream | 221596 | 5338403 ~ 5341971 (-) |
| CI01000055_04744063_04763284 | FAM19A5, FAM19A5B | other | downstream | 793505 | 4743706 ~ 4764067 (-) |
| CI01000055_03918168_03965674 | TCF7L2 | other | downstream | 1607753 | 3911302 ~ 3966460 (-) |
| G240975 | NA | other | downstream | 1839778 | 3717651 ~ 3733995 (-) |
| G241646 | NA | other | upstream | 268138 | 5842194 ~ 5847572 (-) |
| CI01000055_06036788_06037622 | CARTPT, CART2 | other | upstream | 462528 | 6036472 ~ 6037728 (-) |
