G240344


Basic Information

Item Value
gene id G240344
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 6163860 ~ 6164011 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU272730
ATAAATACAGTATTACAGATAGGATTTCAACCCGTTTTGATTTCTTTTCCAGAAATGTCTAGCTCAAGACAAGGCATGCTTTCTTTGTTCTCATCTTCATTTTCTTTAAGTAGTGATAATACTGAAAACATTCAGAATTCACCAAATGAAAGTTGGCAAATGAAGGGAGAGGTTCACAGTCTTTTAGAAGAGAGGATTCGTCCATACATTGATCTGATTGACACTCAGACGGTCAGTTGGCATTCACAAGGACTTGGCATTACCGACTATTGTAGTGATCGGAGACCAGAGTTCTGGAAAAAGCTCTGTGTTGGAAGCACTTTCTGGAGTTGCATTACCAAGAGGAAGCGGAATTGTCACCAGATGTCCACTAGAGCTGAGGCTGAAGAAGGTAACAGGTGGAGTCAGTTGGAAGGCTGTTCCTCAGGAGAATAACATCCACAATAAAAATTAACAATAACCAGCAAAGAACTAAACTGAACAGGGAGTATATATATGCAGGGGATATGCAGGAACTAAATAAGATACAGCTAATGATAATTAATCACAGGAACAAACAGGAACATAACTGAAATTAAACAGACCAGGAAAACATGAACTAAAGGAAACGGAACAGAATATCAAAATAAGAGTCCATAACCATGTCAATTTTTTTTTTTTGCTGGACTCAGCAAGCCGTGTCTTAGCATTTGTACCGTGAGGCTTAATGGTTACCACTGGCAAATTGTGCAGTTCTGAACTGACAGGCTAGTTGGCACGGTTACGATTTTAGGGTTGCATAGGAGTCTGTTGTTAGCATGTTGCAAAGCTAATATTCTAATAAGCATAAAATACACAGAACCCAAGTATTGGGTGAAATAGTCCATTGTTAATTACACTCGATTATATTTATCAATACTTTCCAGTTGTCACGGAACAGAAGGCAGCAGACAGGTAAGTAATATATAAACAGAGTTTATTTCACAGGTTGAGAATATAACAGGATCAGGAAGCAGCAATGGTAAGTATAGCAGTTCAAGTAAATCAGTGGATGACTTAGCTGACGAGTAACTAGAGTATCTCTTGGCAGGTGAACACAGACAAACAGGACGGGCACACGAAGGGCTGGGAGCAGACGACAGGAGATCGATGACTGAAGATCAGTTACATGGCAGCAGGTAAGTCCATAGGTGAGCAGCAGGTAAGGAATCGGTACGTGTGTGTAAACGAGACCAGATAACGGAGTGCAGGTTGTGTGAGCCTTTATGGAGTGCGATGATGAGGTGCAGGTGTGGTGAATTAGTATTCCGGGGAGAGTGAACAAGTGGGCGGATCTTGTGATGATGGACTGATTGGTGTCTGTGATGGTTGCGACTTCGTGAAAGTACCCCCTCCTCCACGAGTGGCTCCTGATGTCCGGAATGTGTGACGACGGGGTCTACCTCGACCTCTAGGTGCTGGGTGATTCAGATGATCAGTGTGGAACTGGGTGAGGAGAGATGGATCCAGAAAATCATCCCGAGCAACCCAGGATCGTTCCTCAGGGCCGTAACCCTCCCAGTCGATGAGGTATTTCAGTTGATTGCCCCGTTGCCACGAATCAAGGATGGAGTGGACCCGGTAGATGACCTCCTCGTCAGCCAGTTCGGGAGGAGGAGGTACCTCATCACCACCAGATCCTGTGAGGGGAGAAGACAAGGGTTCAGTGTGAGGTTTTAATAGAGAAACGTGAAATGAAGGTGAGATCCTGTAGTGTGGTGGTAAGTTGAGCCTGTAAGTTACTTCTTTGATCTGCCTCTGCACCCTGAAGGGACCTATAAGTAACGTGGACTCAGCTTACGGCAGGGCAGGCGGAGTCGGATGTCATGAGTAGATAACCACACCTTCTGACCAGGTTGGTATTGCGTAGTCGGTGTACGGCGGGCATCAGCATGTCTCTTATGTCTCCGTACTGCCTGTTGGAGATGCACGTGTGCTGAGTCCCACACCCTCTCGCTCTGTTGGAACCAATTATCAACAGCTGGAACCTCCGATGGTTCTCCGGACCAGGGGAACAGAGGAGGTTGGTAGCCGAGCATACACTGGAATGGCGTGAGTCCGGTGGTGGGTTGCCTGAAGGATTTCTGGGCCCAGGGGAGGAATCGGCTCCAGCTGTCTTGATTCTGGTAGCAGTAGGAACACAGGTACCTCCCGATCTCTTGGATCTTCCGCTCAGTCTGACCGTTGGTTTGGGGATGATAGCCCGAGGAAAGGCTGACAGTCACTCCGAGAAGCTTGAAGAACGCTTTCCAGACCCGGGAGATGAATTGTGGACCTTGGTCGGATACGATGTCCTCTGGTAGACCAAAATGTCAAAACACATGTTGGAAGAGTGCTTCAGTGGCCTCAAAGGCAGTGGGTAGGCCTCTCAGCGGAATGAGCTTACAGGCCTTTAAAAAGCGATCCACTATGATGAACACGCATGTGTTTTGATCAGAAGATGGGAGGTCGGTCATAAAATCTATGCCGAGATGGGACCACGGTCGAGGTGGAACAGAAAGTGGAACCAGCTTACCCTCTGGGAGTCTCCGTGGGGTGTTGGTTATGGCGCAGACTGAGCAGCTCTTGACAAATCGGGAGATATCCTGGGTCATGGAGGGCCACCAGTAACGATGACGTAGGAGCGAGAGGGTACGATTACTACCTGGGTGTCCAGAGCCCAGAGAGGAATGAGCTGAGTCCATGAGGGGCTGGCAAAGAGCTGATGGAACACAGGTCGGGAGGCCCCTCAGGACCTCCCGGTGGAGCAGGTTCGGAGCGGGTAGCTTGAGTGATCTGGACATCAATGGACAGGATAGGACTGACGATCATGGCTGGAGGGAGAATGGGCTCTGGAGATTCTCATTCAGGATCGGGTCGATGAAGTTGAGACAAAGCATCTGCTCTGCCATTCTTTTCGCCAGGACGATAGGTGACCGTAAAGTCGAACCTAGTGAAGAAGAGGGCCCATCTGGCTTGACGTGGATTAAGGTGCTTGGCTTCACGCAGATATTCTAGGTTACGATGATCTGTGATGACCTCGAAGCGAAACTTTGCTCCCTCCAGCCAATGTCTCCATTCTTCTAACGCTACCTTGATGGCTAGGAGCTCACGATTGCCGATGTCGTAGTTCTGCTCCACCAGGGATAGCTTCTTGGAGAAGAAGGAGCATGGATGGAGGCGTGGAGGATCCCCTTGCCGCTGTGAGAGCACCGCTCCGACCCAGGTGGTGGAAGCATCCACCTCAACAACAAATTGGAGTTCTGGGTGCTGGAAGGGCGACAGATGGAACAGAGGTCGGAGGATATGCAACGGGTAAGGACAGAGAGCAAGCCGACAGGCGCTGTGATACACGAATAGTCTTTTGAATGAAGTTCTCTAATCCCATAGAGTCATTGCAAATTACCATGAGTTGACGAATGTCATTGTTAAGCCCCTGTCGAAACGCTGTGAGCAGTGCAGTCTCATTTCAACCACTTGATGACGCCGGGGTGCAGAACTGGAGAGCATAAGCGCTGACAGAGTGACTTCAAGTTAAACAGTTGATCGTGAACAGAGAGTTCAGATGCAGTCTAACAAAAAACTTCCTTAAAGTGGCTGATAAATGCTGTAAATTACGTGGTTACCTGGGCATTGGAATTACACAGGGATTGTGGAATTCCTCACCGGTGAATGTCGCCGGTCGGGCCATGGGACTGGCAGAGGCAGCAGGCGAAGCAACAGGTGTTATTGGTATGAGTGACTGACGAACTGCTTGTACGACGTCTGCAATTGGATCGGTGGAACGATATCCTCCAGCGTTCGTATAACTCTGCATATTGTGATCTGGTCTTCTGTCACGGAACAGAAGGCAGCAGACAGGTAAGTAATATATAAACAGAGTTTATTTCACAGGTTGAGAATATAACAGGATCAGGAAGAAGCAATGGTAAGTATAGCAGTTCAGGTGAATCAATGGATGACTTAGCTGATGAGTAACTAGAGTATCTCTTGGCAGGTGAACAGAGACAAACAGGACGGGCACACGAAGGGCTGGGAGCAGACAACAGGAGATCGATGACTGAAGATCAGTTACATGGCAGCAGGTAAGTCCACAGGTGAGCAGCAGGTAAGGAATCGGTACGTGTGTGTAGACGAGATCTTGTGTTGATGGACTGATCGGTGTCTGTGATGGTTGCGACTTTGTGAAAGTACCCCCTCCTCCATGAGTGGCTCCTGACGTCCGGAATGTGTGACGACGGGGTCTACCTCGACCTCTAGGTGCTGGGTGATTCGGATGATCAGTGTGGAACTGGGTGAGGAGAGATGGATCCAGAACATCATCCTGAGCAACCCAGGATCATTCCTCAGGGCCGTAATCCTCCCAGTCGATGAGGTATTTCAGTTGATTGCCCCATTGCCACGAATCAAGGATGGAGTGGACCCGGTAGATGACCTCCTCGTCAGCCAGTTCGGGAGGAGGAGGTACCTCATCACCACCAGATCCTGTGAGGGGAGAAGACAAGGGTTCAGTGTGAGGTTTTAATAGAGGAACGTGAAATGAAGGTGAGATCCTGTAGTGTGGTGGTAAGTTGAGCCTGTAAGTTACTTCTTTGATCTGCCTCTGCACCCTGAAGGGATTTGATTCTCTTAAGTCTGCATTCAATGCATCCTCGATATAAAGAGCACAACTAGGTAATTTTATGCATCCTTGATACTTCTTAAGAGTTGGAATTGTACTTTGGTGGTTGATGATGATGTAGAATGAGAGCACAATGATGCAAGATCGCATTAGAATGAATATTGAGAAATGTTCCAGGTATCTCCTATCTCCTCTTCCTTTATAATTAATGAAGCTGTTAACACTACAAGCACCAACAGCCTTGTGAGCACGCCGACATATTGCACAGTTGCGCTTCGGGTGTCCCGAGTTCGAGTCCTGGCTCGTGGACCTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCAACTTCGCTTCCTGTCAACTTACTGTCCTGTCATATCATAATCATAATAAAGGCAAAATCGGCAAGAATAAATCTTAAAAAAAAAAAAAACCCACTGTGAATGAAGCACCTTTCCGTTGACTTCACTTCTAAAGTATTATCATTATGTACTAGGGTATTTGTCTCACTGTGTGTCTCTCTGCTCTCCTGGCAGTTGACTGACAGCATTTATGGATTTACTGAATGTGTAAAACATGTTTTATGGCCAATTATGTCAATGAAAAGTGTTAAAGAGAAGCTTCAGACTCTTCTTTTGCACTACTGGCACTTCATTAAAGGGCACTGTTTTCTTAGAAGCCTTTATATAATAAATGACCAATGATTTTGGTTGAGAAACATAGTTTATGTGTTTTACAGCCCAGAATGAACTGGCAGGAAAAGGGGTAGGAATATGTGATGAGCTCATCACTCTAGAGGTCATGTCACCAGATGTGTGTGACCTCACACTGATCGATCTACCTGGAATTGCCCGAGTCCCAGTAAAAGGACAACCAGAGGATATTGGAAAACAGATCAAAAGTCTGATAACAAAGTTTATTAAGATGCAAGAGACTATAAACATGGTAGTAGTCCCTTGTAACACTGACATTGCAACAACAGAAGCATTAAAAATGGCACAAGAAGTAGATCCTGAAGGCATAAGAACTATTGCCATTTTGACCAAGCCAGACCTCATAGACAAGGGAACAGAGAGGAACATTCTAGACATTATCCAGAACAAAGTGATTCCCCTCCGCAAAGGTTACATCATGGTGAAGTGTAGAGGACAACAGCAGATCAATGAGAAAATTCCTCTAGAGGAGGCAGCTCAAATGGAGAGAGATTTCTTCCAAAATCATGACTATTTCAGAGGCCTCTTGAATGAGGATAAAGCGACTATTAAATGTCTTGCTGTCAAGCTGACTCAGAATCTTGTTGATCATATCAAAAAATCACTGCCACAGCTCAATGAGCAGATCAAAAATCGGTTGTGGGACGTGAGGAATGAGCTCAAGGAGTGTGAGGCTGGACCACCAGAAGATCTTAAGGGAGCCAAACAATTCCTCACTGAAACCATAAAAAGATTCAATGATCAAATCAACTCCTTATCATCAGGAGAAGTGATGAGTGAGGAAAATTTGTTTGTCCAGCTCCGGGCTGAATTCAAGGAGTGGAGTGATCATCTTAACAGTACAAAGACATCCTGTCAGTATATTTCCAAACATGCTACAACTTTGAATTTACTGTTGTTTTTCCTTAGAGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272730 True 152 TUCP 0.46 1 6163860 6164011

Neighbor

gene id symbol gene type direction distance location
CI01000055_06154806_06161718 NA coding upstream 1784 6154806 ~ 6162076 (+)
CI01000055_06148933_06151962 NA coding upstream 11655 6148684 ~ 6152205 (+)
CI01000055_06143884_06145039 NA coding upstream 18437 6142785 ~ 6145423 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B coding upstream 75112 6087034 ~ 6088759 (+)
CI01000055_06076584_06085051 NEDD1 coding upstream 78191 6076584 ~ 6085669 (+)
CI01000055_06233829_06238021 NA coding downstream 39929 6233829 ~ 6238021 (+)
CI01000055_06238643_06245138 NA coding downstream 44743 6238643 ~ 6245317 (+)
CI01000055_06247679_06298687 CELSR1B coding downstream 53779 6247679 ~ 6299580 (+)
CI01000055_06310117_06334586 GRAMD4B, GRAMD4 coding downstream 116217 6310117 ~ 6334801 (+)
CI01000055_06349198_06350625 KCNA6A coding downstream 154511 6348411 ~ 6351516 (+)
G240450 NA non-coding upstream 189 6163361 ~ 6163671 (+)
G240444 NA non-coding upstream 27720 6135903 ~ 6136140 (+)
G240433 NA non-coding upstream 40178 6120554 ~ 6123682 (+)
G240432 NA non-coding upstream 44076 6119544 ~ 6119784 (+)
G240431 NA non-coding upstream 44706 6118918 ~ 6119154 (+)
G240453 NA non-coding downstream 6238 6200138 ~ 6200482 (+)
G240358 NA non-coding downstream 137431 6331331 ~ 6333548 (+)
G240472 NA non-coding downstream 206093 6399993 ~ 6400807 (+)
G240473 NA non-coding downstream 207401 6401301 ~ 6401914 (+)
CI01000055_05614889_05616453 NA other upstream 546269 5614065 ~ 5617591 (+)
G240099 NA other upstream 620048 5525472 ~ 5544153 (+)
CI01000055_05163240_05166231 PIGY, PYURF other upstream 997213 5162990 ~ 5166647 (+)
CI01000055_04265119_04272728 NA other upstream 1891145 4265119 ~ 4273913 (+)

Expression


Co-expression Network