G240479


Basic Information

Item Value
gene id G240479
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 6412854 ~ 6413389 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU272900
CCCGTCTCAGGTTTTGTGTCCCCAACAGTTTGTTAAGAAAAATATAACGAACACAAACGCTGTGATTTGTTGCCGTTTCAACCACACGCACTTCAGTCCCTTTGAGGACGTATATGCTACTGTCAGGTAATTGGCTCCATGTAAGGTGTATAACTGGCACAAACTGTCCACTATCATCCCTCTTGGCTTTTACACTTGCAGTTACAACAGGAGAAGAACCTGGGACTTTAGTCCATGGCATCACCCAACCCTCATCTGAACAGTTCCCAACTTGAACATTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272900 True 282 lncRNA 0.45 3 6412854 6413389

Neighbor

gene id symbol gene type direction distance location
CI01000055_06377893_06381162 TMEM178B coding upstream 31639 6377754 ~ 6381215 (+)
CI01000055_06357064_06359067 KCNA1A, KCNA1L, KCNA1.S, KCNA1 coding upstream 53787 6356424 ~ 6359067 (+)
CI01000055_06349198_06350625 KCNA6A coding upstream 61338 6348411 ~ 6351516 (+)
CI01000055_06310117_06334586 GRAMD4B, GRAMD4 coding upstream 78268 6310117 ~ 6334801 (+)
CI01000055_06247679_06298687 CELSR1B coding upstream 113274 6247679 ~ 6299580 (+)
CI01000055_06420746_06423701 NA coding downstream 6775 6420164 ~ 6424149 (+)
CI01000055_06424643_06428152 TNNI1AL coding downstream 11076 6424465 ~ 6428321 (+)
CI01000055_06432420_06434344 NA coding downstream 19031 6432420 ~ 6434486 (+)
CI01000055_06439930_06442140 NA coding downstream 26475 6439864 ~ 6442153 (+)
CI01000055_06443549_06446405 BPGM coding downstream 30160 6443549 ~ 6446441 (+)
G240473 NA non-coding upstream 10940 6401301 ~ 6401914 (+)
G240472 NA non-coding upstream 12047 6399993 ~ 6400807 (+)
G240358 NA non-coding upstream 79306 6331331 ~ 6333548 (+)
G240453 NA non-coding upstream 212372 6200138 ~ 6200482 (+)
G240481 NA non-coding downstream 803 6414192 ~ 6414489 (+)
CI01000055_06487661_06489302 NA non-coding downstream 74616 6487661 ~ 6490167 (+)
G240355 NA non-coding downstream 83280 6496669 ~ 6498737 (+)
G240315 NA non-coding downstream 88663 6502052 ~ 6508423 (+)
CI01000055_06513312_06529035 NA non-coding downstream 99295 6512366 ~ 6529510 (+)
G240344 NA other upstream 218954 6163860 ~ 6164011 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other upstream 324095 6087034 ~ 6088759 (+)
CI01000055_05614889_05616453 NA other upstream 795263 5614065 ~ 5617591 (+)
G240099 NA other upstream 869042 5525472 ~ 5544153 (+)

Expression


Co-expression Network