G240355


Basic Information

Item Value
gene id G240355
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 6496669 ~ 6498737 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU272741
TGGTAGGTAGGACAAATTTGTTAAGCCTAGGAACAGTTAGTCAGCAATGGTGTCAATTTCAATATTAACAAATATTGGCTTAATCATCACTAAAGGCCCGTTCACACAAAGAACGATAACTATAATAATAACTATATTAGCATCCACACCAACGGACCCACAATAAACATTCTGTTTATTCTAAGTGCGCACTGCAGTTTTGTCATCTGGCACTTTAAATCCTCCAGCTCTTTAGTCAGGTGGATCGTGGTTAGAAATCAATGGTTTTATTTTTCATGAGCTGGAGAAAAAAAAAAAAAAAAATGCTCTAAAAGTAATATTACTCCTGTCATTGTAATTGTGATGTAGACTTTGCTATTCGCAATTATTAAAACTTTATCGTTCTTGGTGTGAACAGGCCCTAAAGGGATAGTTCACCCAAAGATGAAAATTACCCTATGATTTACTCACCCTCAAGCCATCCTAGGCGTATATGACTATCGTCTTTCAGACGAACACAAACTCAACTGGGCAACAAACTCAAGCTCCTCCTCTCTTATTGAAATCCTCTGACATTTCCATTTAAAAATTCTCGTTCTAGACTCTTTAGACTCGCGTTCGTCAATACGTCATGCGTTGTGTCAGATGTTGCGCTTTTGCCGTAAGTCGACTTGTATATGGATGTTTGTCGGAACTGGTTATTTTATTACTGGTTAAGTTGTAAATATGGATATTTTTCTTACAAAAAAACATTGCTTTGCTTCAGAAGGCCTTTATTAACCCCATGGAGCCGTATGGATTACTTTTATGATGGATGGATGCACTTTNNNNNNNTTCAAAATCATGAGTGCCATTCACTACCATTATAAAGCTTGGAAGAGCCAGGATATTGTGTTGCAATTGTGTTCATCTGAAAGAAGATAGTCATATACACCTAAGATGGCTTGAGGGTGAGAAAATCATGGGATAATTTTCATTTTTGGGTGAACTATCCCTTTAAAGTCAGCATGAAACAGAAGTAGTCTTTTCTTCCTATTGTGACATATTTTGAGTGAAACGGCTTTTTCGAATGAGAAAAATGTAGGGCGGGACTTGATTTTGTCCATTGGGAATTGATTGGATGGGTGTGGTTTGTTATTGGTCGATCTCATGCGAGTGACAAGTTGTCCCACCCTCGCGCCGGCAAACACGTCATCAGAGAAGAGAAGTCGCTGCAAGTGGGAAGGGAAGTTATTTTGTTTAAAGAATTTAAAAAAATAACGATGAGCATGAATAAAATCATTTATAATAAATACTGCAAAATTCTATAAAAAAAACAGGAATTGCCCATTTTGATTTCATGGTGACTTTAAAGGGTCATGAAACCCCAAACACATTGTTTGAGATTTGAACAAGTATGTACAGGCTGTACATCAATGTAAACACTAAAATCACTCTAAATTTAACCAAGAAGTGGAAATTGGTTATTTTTGCGTTTTTCTAAGCATTCTCGTTCTTCCAGGTTAAAAAGGAAAGTCGATAGTCACGGAATCTGACATAGAAGCGTGCCTCCGGAGTGTGTGATTGGCTGCTGGGGCTGGAGAGGCACAAATCTACGTCAGCCGGTTCTGAGCGCTTCCCTGCATTTATTCATAAGAATGAACTCTTTTAACCCAATCACTGCGCTGTCTTACGCATGAGATCGCATTACAGTGGAGAATTCAAACAACATATAACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272741 True 1698 lncRNA 0.38 2 6496669 6498737

Neighbor

gene id symbol gene type direction distance location
CI01000055_06487661_06489302 NA coding upstream 7283 6487661 ~ 6490167 (+)
CI01000055_06472841_06481094 NA coding upstream 15513 6472841 ~ 6481156 (+)
CI01000055_06443549_06446405 BPGM coding upstream 50228 6443549 ~ 6446441 (+)
CI01000055_06439930_06442140 NA coding upstream 54516 6439864 ~ 6442153 (+)
CI01000055_06432420_06434344 NA coding upstream 62183 6432420 ~ 6434486 (+)
CI01000055_06513312_06529035 NA coding downstream 13629 6512366 ~ 6529510 (+)
CI01000055_06530845_06542679 NA coding downstream 31254 6529991 ~ 6542725 (+)
CI01000055_06716393_06716976 KXD1 coding downstream 217656 6716393 ~ 6716976 (+)
CI01000055_06718992_06719248 NA coding downstream 220255 6718992 ~ 6719559 (+)
CI01000055_06720233_06726592 ERGIC2 coding downstream 221133 6719870 ~ 6727509 (+)
G240481 NA non-coding upstream 82180 6414192 ~ 6414489 (+)
G240479 NA non-coding upstream 83280 6412854 ~ 6413389 (+)
G240473 NA non-coding upstream 94755 6401301 ~ 6401914 (+)
G240472 NA non-coding upstream 95862 6399993 ~ 6400807 (+)
G240315 NA non-coding downstream 3315 6502052 ~ 6508423 (+)
G240550 NA non-coding downstream 141891 6640628 ~ 6641114 (+)
G240555 NA non-coding downstream 152328 6651065 ~ 6651326 (+)
G240557 NA non-coding downstream 154757 6653494 ~ 6653702 (+)
CI01000055_06310117_06334586 GRAMD4B, GRAMD4 other upstream 155504 6310117 ~ 6334801 (+)
G240344 NA other upstream 302769 6163860 ~ 6164011 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other upstream 407910 6087034 ~ 6088759 (+)
CI01000055_05614889_05616453 NA other upstream 879078 5614065 ~ 5617591 (+)
G240099 NA other upstream 952857 5525472 ~ 5544153 (+)

Expression


Co-expression Network