CI01000057_00000056_00000860


Basic Information

Item Value
gene id CI01000057_00000056_00000860
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 56 ~ 2435 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_00000056_00000860.mRNA
AAATACACTACCAGTCAAAAGTTTCATAATAAATACAGAAAAAACAATAACATTGTGAAATATTATTACAATTTAAAATTATGGTTTTCTATTTTAATATACTTTAAAATATAATTTATTTCTGTGATGCAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTGTAATATGCTGATTTATTATCAATGTTGGAAACAGTTGTGCTGCGATACTTTTTCAGGATTCTTTGATGAATAAAAAGTTAAAAAATATCAGCATTTATTTAAAATAGAAATCTTTTGTAACAATATACACTACCGCTCAAAAGTTTGGGGTCAGTAATTTTTTTTCTTTTTTTGAAAGTAATTAATACTTTTATTCAGAACAGATGTGTTAAATTGATAAAAAGTGATAGTAAACATTTATATTGTTAGAAAAGATTTATATTTTGAATAAATGCTGTTCTTTTTAACCTTTTATTCATCAATGAATCCTAAAAAAAAGTATCACAGGTTCCAAAAAAATATTAAGCAACTGTTTTCAACATTGATAATAACTAAGTATCAAATCAGCATATTAGAATGATTGCTGAAGGATCATGTGACACTGAAGACTGAAGTAATGATGCTGAAAATTCAGCTTTGATCACAGGAAATAATTATATTTTAAAGTATATTAAAATAGAAAACCATAATTTTAAATTGTAATAATATTTCACATTATTATTGTTTTTCTGTATTTATTATGAAATAAATGCAGCCTTAATGAGCATAAGAGATATTACCTTTCATGCAGTGTGTAATATAGCTGTTTGTGAATGTAAATGAATGCACAATAAAGTTATTGTCTCCCAGAAGAAAGAATAGTTTCTGGACTGCCAAAACGAGTCATCAGTAACTCCAGTCTTATTTCCGTAACATTCATACGTAACATTGTAACAAATTTGCATAATGCTGACCTATGGTCTTCATTGGCTGCCGGTGAACAATGTCTAATTTGACCCGCCCTCAAGTACTGTAGCTGGTTCATGTTGTGTACATGTTGAGAAGACGCTGTTTTCTGTGCTGCAAAAGCAAATTCTCTTGGTAAACAATGGTAAGCACTTCTAAAGGATTTGAAGAGAAAGTGGTTAAAATTATCACAGCGATAACACAGCAGTATAACCTTTTGATAACTGCTTCTCAAATCTCTGTGAGGTCTCAATGGGATTTACAAAAAGCTTATCCATTAAAGATAGGACAGTACCCACTTTATTTGGACCAATTTGCTCCTCTGAATCACAACCTTTCAGTATGATTAATTATTGATGTACACACTTTGTTCATTTGTTCAGGTGTTCTGTGTTTTATATTGTGTAGGGCTAACCGGCTAACTCATGTTAATACTGTCTTACTGAAATACTTCTGAGCAGTTTTACAGACTTTAATGTTATATCAGTCATTCATGTTAGTGCTCGGTTAATGTATGCACACAGTTATTGACAGTTTCCACATGTCCACCGCAATAAAAGAGAAATATACACATACCATATTAGAATCATCTACAAGTGACATTGGTTCAACACTGATGACTACATTACCCACAACAGGTACCTCTACATCTTCACCATCCTCTACAACAGAAAGTACATCAGAATTGACTTCACCCACAACAGAAATATCTTCAGCTAATGTAGAGCAAACAACAAGCCAGCAAACACAAACCACTCCAGTTACTTCTAGCACAGAGGCAGAATCTAGAACAGCTCAATCAACATTTACAACAGCTATGTCCCCGATGAGCACAACCATATTAGAATCATCTACAAGTGAGAGTGCTTCAACACTGGGGACTACATTACCTACAACAGGTACCTCTCCATCTTCTCTATCCTCTACAACAGAAAGTACATCAGAATTGACTTCACCCACAACAGAAATATCTTCAGCAAGTGTAGAACAAACAACAAGCCAGCAAACACAAACCACTCCAGTTACTTCTAGCACAGAAGCAGAATCTACAACAGATCAATCAACATTTACAACAGCTATGTCCCCGATAAGCACAACCATATCAGAATCATCTACAAGTGACAGTGCTTCAACACTGGGGACTACATTACCCACAACAGGTACCTCTCCATCTTCTCTATCCTCTACAACAGAAAGTACATCAGAATTGACTTCACCTACAACAGAAATATCTTCAGCTAGTGTAGAGCAAACAACAAGCCAGCAAACACAAACCACTTCAGTTACTTCTAGCACAGAAGCAGAATCTACAACAGCTCAATCAACATTTACAACAGCTATGTCCCTGATAAGCACAACCATATCAGAATCATCTACAAGTGACAGTGCTTCAACACTGGGGACAACATTACCCACAACAG

Function

NR:

description
PREDICTED: flocculation protein FLO11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_00000056_00000860.mRNA True 2380 mRNA 0.34 1 56 2435

Neighbor

gene id symbol gene type direction distance location
CI01000057_00009669_00010359 MRPS16 coding upstream 7203 9638 ~ 10359 (-)
CI01000057_00208733_00214195 NA coding upstream 206071 208506 ~ 214265 (-)
CI01000057_00249540_00251667 NA coding upstream 246338 248773 ~ 251771 (-)
CI01000057_00257594_00301277 NA coding upstream 255136 257571 ~ 301508 (-)
CI01000057_00314025_00331813 NA coding upstream 311111 313546 ~ 331813 (-)
G244150 NA non-coding upstream 126057 128492 ~ 133635 (-)
G244157 NA non-coding upstream 142922 145357 ~ 146460 (-)
G244178 NA non-coding upstream 163163 165598 ~ 167187 (-)
G244180 NA non-coding upstream 168721 171156 ~ 173758 (-)
G244264 NA non-coding upstream 306351 308786 ~ 309057 (-)
G244358 NA other upstream 568095 570530 ~ 571028 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other upstream 1799149 1801528 ~ 1806454 (-)
CI01000057_01904867_01921400 NA other upstream 1917621 1904533 ~ 1921905 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other upstream 3889300 3887203 ~ 3892054 (-)
CI01000057_04927533_04931127 CDK4 other upstream 4926309 4927533 ~ 4931420 (-)

Expression


Co-expression Network