Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000057_00561471_00562830 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 561229 ~ 562857 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| pol polyprotein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000057_00561471_00562830.mRNA | True | 692 | mRNA | 0.50 | 3 | 561229 | 562857 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_00534471_00559759 | NA | coding | downstream | 1470 | 533588 ~ 559759 (-) |
| CI01000057_00475661_00476027 | NA | coding | downstream | 85202 | 475392 ~ 476027 (-) |
| CI01000057_00459703_00467870 | ABHD6A, ABHD6 | coding | downstream | 93359 | 458943 ~ 467870 (-) |
| CI01000057_00420698_00421063 | NA | coding | downstream | 140166 | 419986 ~ 421063 (-) |
| CI01000057_00409300_00412579 | NA | coding | downstream | 148604 | 409168 ~ 412625 (-) |
| CI01000057_00628126_00628851 | NA | coding | upstream | 64858 | 627715 ~ 630166 (-) |
| CI01000057_00873279_00873578 | NA | coding | upstream | 310417 | 873274 ~ 873578 (-) |
| CI01000057_00938618_00949690 | NA | coding | upstream | 375214 | 938071 ~ 949779 (-) |
| CI01000057_00956994_00965947 | NR1D4B | coding | upstream | 392776 | 955633 ~ 965947 (-) |
| CI01000057_01083731_01092073 | NA | coding | upstream | 520857 | 1083714 ~ 1092631 (-) |
| G244339 | NA | non-coding | downstream | 80812 | 480197 ~ 480417 (-) |
| G244338 | NA | non-coding | downstream | 81075 | 479943 ~ 480154 (-) |
| G244287 | NA | non-coding | downstream | 145620 | 413912 ~ 415609 (-) |
| G244305 | NA | non-coding | downstream | 153400 | 407220 ~ 407829 (-) |
| G244359 | NA | non-coding | upstream | 11679 | 574536 ~ 574885 (-) |
| G244360 | NA | non-coding | upstream | 13010 | 575867 ~ 576145 (-) |
| G244367 | NA | non-coding | upstream | 68263 | 631120 ~ 631439 (-) |
| G244370 | NA | non-coding | upstream | 69719 | 632576 ~ 632905 (-) |
| G244380 | NA | non-coding | upstream | 191073 | 753930 ~ 759844 (-) |
| G244358 | NA | other | upstream | 7673 | 570530 ~ 571028 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | upstream | 1238727 | 1801528 ~ 1806454 (-) |
| CI01000057_01904867_01921400 | NA | other | upstream | 1357199 | 1904533 ~ 1921905 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | upstream | 3328878 | 3887203 ~ 3892054 (-) |
| CI01000057_04927533_04931127 | CDK4 | other | upstream | 4365887 | 4927533 ~ 4931420 (-) |
