CI01000057_00628126_00628851



Basic Information


Item Value
gene id CI01000057_00628126_00628851
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 627715 ~ 630166 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000057_00628126_00628851.mRNA
AAATGATTATGTAGTACTGAAAGAACAATTCAGGCGTTACTGTGAACCGAGGAAAAATTTAACATATCTAAGGCACATGTTTTTCACTCGAGCTCAGGGACCGACTGAATTGATTGATGCTTATGTGACTGAGTTAAAAAACAAAGCCAAAGAATGTGAATTTGCACAGTTGACTGAATCACTGATCCGAGACCGCATAGTGTGTGGTGTAAACAATGATCAAATAAGAGTTCGACTCTTAAAGGAACACTCCACTTTTTTGGAAAATAAGCTCATTTTCCAACTCCCCTAGAGTTAAACAGTTGAGTTTTACCGTTTTCGAATCCATTCAGCCGATCTCCGGGTCTGGCGGTACCACTTTTAGCATAGCTTAGCATAGTTCATTGAATCTGATTAGACCGTTAGCATCTCGCTCAAAAATGACCAAAGAGTTTTGATATTTTTCCTATTTAAAACTTGACTCTTCTGTAGTTACATCAAGTACTAAGACCGACGGAAAATGAAAAGTTGCGATTTTCTAGGCCGATATGGCTAGGAACTATACTCTCATTCCGGCATAATAATCAAGGAACTTTGCTGTCATACCATGGGTGCAGCAGGAGCAATGATATTACGCAGCGCCTGTGACCCCCTGCTTGCACAGGGAGCGTGCCTTGCAACCATGAAGACATTTGTGAGAATATCATTGCGCCTGCTGCACCCATGGTATGGCAGCAAAGTTCCTTGATTATTACGCCGGAATGAGAGTATAGTTCCTAGCCATATCGGCCTAGAAAATCGCAACTTGGTACATGATTTAACTACAGAAGAGTCAAGTTTTAAATATGAAAAATATCTAAACTCTTTGGTCATTTTTGAGTGAGATGCTAACGGTCTAATAAGATTCAATTAACTATGCTAAGCTATGCTAAAAGTGGTACCGCCAGACCCGGAGATCGGCTGAATGGATTCAAAATAGGTAAAACTCAACTGTTTAACTCTAGGGGAGTTGGAAAATTAGCCTATTTTTTTAAAAAAGTGGAGTGTTTTTTTAAGAGAACTGGATCTTGATCTGAACAAAGCTGTGGATATCTCCAGAGTGAGTGAAGTCACAAAAAGCCAAATTAAAGCACTCCACGAGGAAACAGAAGTGACTGTGAATAAAATTAGCAAGCTAAAGCTAACAAAGAAGTCACCTGAGAATAGTTCTGCTCCAAGCGCATGGTCAAAGAAAGAAGAGGAATGTACAAGATGTGGTTACAGGCATGAACCGAGGAAGTGTCCTGCTTATGGACAAATATGTAAAGTGTGTCCCTGAAAAAATCACTTTGGAAGGATGTGCAAAACGCAAAAACAGAAAGACAAAACAAAGTTCACAGTAAGAAAAGTTCATGAAATTGAACAAGAAGATCACACAGAACTGTTCGTGGGTGCCCTTGAAGAGAAGCAGACTGAAAAGAAAACCGAGAGACAGTTTAATAAAGCAGCGGATACCACAGTTGTCGAAAAAGACAAGTGGACAGAAACACTTAAAGTAAACAAAAGAGTGCTTTCTTTTAAACTGGATACTGGAGCAGAATGCAACGTGAGTTCTTATAAAGACTTCAGAGCAGTTGCAGGAAAATCTGTGACAATGCGCAAGTCGAACTGCGTGTTAGTGGCATACTCTGGCCACAAGATGGAGCCGAAGGGTAAAGTAAAGCTCATCTGCCAGTTCAAAGACAATGAAGCTGAGATTGAGTTCCAGATTATAGAGAAAGATTCACCTGGTATCCTGGGAAGGTCTGCGTGCAGAGAGTTAGGACTGGTCAAAAGAGACTACAAGGTGGACTGTGAAGAAAACACTGACATTCTGAAGAAATATGATGATGTGTTCAATGGTTTGGGGTGCGTACCTGGAGTACATCATATCAAGATTGATCTGACAGTGTCTCCGGTGATATGTCCTCCCAGAAAAGTGCCAGTCGCACTAAAAGACAAAATGAAAATGGAACTAAATAGAATGGAAAGTCTTGGAGTGAGAAACAGACAGAACCAACAGACTGGGTCAATAGTATGGTGAAGCTGAACAAACAAGAATCTGCATTGACCCCAAAGATTTGAACAAAGCTATAAAAAGAGAACACTTTCCACTCAAGACAGTTGAAGAAGTGGTGAGTGAAATGCCAAATGCCAAAGTCTTTTCAGTATTGGATGCTAACCATGGGTTTTGGCAAATTCAGTTGGATGAAGCAAGTTCCAAGCTTTGTACATTTAATACACCTTTTGGCAGATACTGTTTAAAGAGGTTACCTTTTGGTGTATCATCAGCCCCAGAAGCCTTCCAGAAGTGCATAGCACAAAGACTTGAGGACCTGGAGGGAGTTGTGAATTTCATGGATGACATACTTGTATGGGGAGAAAATCTGGAAGAGCATGATCAGAGGCTCAGGCGGCTTCTAGAGAGAATCAGGAGCATAAATCTGAAATTAAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000057_00628126_00628851.mRNA True 2452 mRNA 0.41 1 627715 630166

Neighbor


gene id symbol gene type direction distance location
CI01000057_00561471_00562830 NA coding downstream 64858 561229 ~ 562857 (-)
CI01000057_00534471_00559759 NA coding downstream 67956 533588 ~ 559759 (-)
CI01000057_00475661_00476027 NA coding downstream 151688 475392 ~ 476027 (-)
CI01000057_00459703_00467870 ABHD6A, ABHD6 coding downstream 159845 458943 ~ 467870 (-)
CI01000057_00420698_00421063 NA coding downstream 206652 419986 ~ 421063 (-)
CI01000057_00873279_00873578 NA coding upstream 243108 873274 ~ 873578 (-)
CI01000057_00938618_00949690 NA coding upstream 307905 938071 ~ 949779 (-)
CI01000057_00956994_00965947 NR1D4B coding upstream 325467 955633 ~ 965947 (-)
CI01000057_01083731_01092073 NA coding upstream 453548 1083714 ~ 1092631 (-)
CI01000057_01145522_01147560 NA coding upstream 513896 1144062 ~ 1147772 (-)
G244360 NA non-coding downstream 51570 575867 ~ 576145 (-)
G244359 NA non-coding downstream 52830 574536 ~ 574885 (-)
G244339 NA non-coding downstream 147298 480197 ~ 480417 (-)
G244338 NA non-coding downstream 147561 479943 ~ 480154 (-)
G244367 NA non-coding upstream 954 631120 ~ 631439 (-)
G244370 NA non-coding upstream 2410 632576 ~ 632905 (-)
G244380 NA non-coding upstream 123764 753930 ~ 759844 (-)
G244391 NA non-coding upstream 207395 837561 ~ 838099 (-)
G244462 NA non-coding upstream 207969 838135 ~ 839154 (-)
G244358 NA other downstream 56687 570530 ~ 571028 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other upstream 1171418 1801528 ~ 1806454 (-)
CI01000057_01904867_01921400 NA other upstream 1289890 1904533 ~ 1921905 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other upstream 3261569 3887203 ~ 3892054 (-)
CI01000057_04927533_04931127 CDK4 other upstream 4298578 4927533 ~ 4931420 (-)
G246780 NA other upstream 4580944 5086312 ~ 5283617 (-)

Expression



Co-expression Network