CI01000057_02844117_02844398


Basic Information

Item Value
gene id CI01000057_02844117_02844398
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 2843791 ~ 2846738 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_02844117_02844398.mRNA
AGACACCACACAAAATCTAATTAACCCCATGAGGTATCATCTGCAATTCTTGGAAATAGACTCAGATCTGATCAGCAGAAGCCCATGACTTTCCTGTCTGTGTGACTCCTGGCTTTGTGGAGGATGTTGATAAATACATTATGCCCATAATAGAGGGATATTCACTTTCAGAGCAGACACAGTCCACCCTCTGCTGCTCTTCACCATGTTACTGATCCCTAATCAATGAGATCAAGGACAGGCTTCCAGAACCCCAGATTATGTAGCAATACAAAACATATTGTAGCGCTTGCTTGTGTATATGTGTATGTGTAAGTACTTTTATCCCACACTGAATTCTATCTGTAAGCTCTGAATAAATACACAGAAATCTTTTGTATTTCATAACCATGACGCAACATTCTCCATGCACAAAACATTGATCTTGGCCACACATATGCTCACATTGTTCACTCAGTTAACAGCAAGCAGATATTGCAACACATTTATTTGCCATCACTGTTTAAAAGAAACAATATTTACATACACAAACACGAAAAGAAGCAAAATTAAAAAAAAATTTGGTGTCCACTGAACAAGAGATATGTTGACTCTATTGTTTGTTATGTAAAAATACTTATTTTGAGTTTTGTTTTTTGTAATAATTATGTGAATATTATATAATTTTTATTTTATTATTCCATAGCTACATAAGCCCACATACTGTGTAGACTCTCTGACTCCCTTGTGCCAACACACTCTCTGTCCAACCAATGATTATGGATTCATAATCCTCACAAACATGAAATATCTCTTTTAATGGATTAACAGCATTTAGTATAACCCAAAAAGGTCATATCAGTGATATTAGTCCATGGACTGTGAGAGATTTACTTTTAGCTTTATTTTCCTGATGCATATGACATTTTCATATATGATTTGATTGTGGAAATTGCTTCTAGGGGAAGAGAAAATAACTATTTTGAGTACAGTGGTCAACTATGCAAAATCTAAAAAATTGTACATTTTCTAAAAGAAAAATGTGGTGTTTATATGTAAAAAATGCACTGCCACAATGTATTGTTGGTTACATGCTGAGCAGCATGTTGCTAGGTGGTTGCTGAGGTCTTCTGGATGGATGCTACTGTAGGTGCTTGCTACCGGCCCAAGTCAAAAGAACCCATCACCAAGTCTCTATGATATTCTGATATAATACTCTGATATTTTCTTACTTGAATTATCTGCCAGGTGACAAAAGTCACCATAAATCCAATCACACCTCTTCTCAACAAGCTGCATTATTTGAAGTATCATTCATATCTGCAGCACGAAGTGTGGGCCAAAGTATAGTACTTGGTTGGTTTGTTCCCTTACCCTTACAAAGTACACTATATTGCCAAAAGTTTTGGGACACCTGCCTTTACGTGCACATGAACTTTAATGACATCCCATTCTTAATCCATAGGGTTTAATATGGAGTTGGCCCACCCTTTGCAGCTATAACAGCCTCAACTCTTCTGGGAAGGCTTTCCACAAGGTTTAGGAGTGTGTTTATGGGAATTTTTGACCATTCTTCTAGAAGCGCATTTGTAAGGTCAGGCAGTGATGTTGACGAGAAGGCCTGGCTCGCAGTCTCCGCTCTAATTCATCCCAAAGGTGTTCTGTCGGGTTGAGGTCAGGACTCTGTGCAGGCCAGTCAAGTTCCTCCACACCATCTCTACGCACTGTTCTTGAGCTAATCTGAAGGCCACATGAAGTTTGGAGGTCTGTAGCTATTGACTCTGGAGAAAGTTGGCGACTTCTGCGCACTGTGCGCCTTAGCATGTGCTGACCCCGCTCTGTGATTTAACATGGCCTACCACTTTGTGGCTGAGTTGCTGTTGTTCCCAATTGCTTCCACTTTGTTATGATACCAGTTGACCGTGCACAGGTGGCAACCTATCACAGTACCACGCTTGAATTCACTGAGCTCCTGAGAGCGACCCATTCTTTCACAAATGTTTGTAGAAGCAGTCTGCATGCCTAGGTACTTCATTTTATACAACTGTGGCTGCATGGAAGTGATTGGAATACCTGAATTCAATGATTTGGAGGGGTGTCCCAATACTTTTGGCAATATAATGTAATTGCCAGGACTAAAATCGTCAGGAAGGTGGTCCTCTAGGAGCAGGATTCGACACCCTTAACTTTGACCAACATGTAGTACCAGTACTAATGCAGCTATCTCATGTGCTAAGACTAATAGGAACCAATGGAGTTAAAGACAGCATGAATAGAGGGCCTCTTTATTAGAGGCTTTCATTACAGAGAAGAAATCGCTGTTTGTGTGGATACATTCGTTAGTGTGTGCACTCTACCACTATGAAACACTTTAGCCACAGAGAGCTTACTGGCACAGTGCCGTGTCGGCCATTAAGCAAGTATCTTTTAGTTACTGTTGGCACTTTTGCCTCTTTGGTGCTGAGAGACCCTGCAGAAGACAGTCAATCTGTAGAGGACATTAAAAGAGAGAGAAAGGGATGGGGATCTAAAATCCACACAGATAACGGCGGGCATCAAAGCTGGCACAGTGCACGCAAGGGTGGCAGAGGAAATAGGTCACTTTCAGAACAGTGCCTCTTTTCTCAAGCCTTCTCTAGATAAGCTTTTTATGTGGCAGTGATAGAGCTCTTTACGAAAAGTTAAACTAAACATTGAAAAAAATCAGTCAGGAGAAGTGATGCTAAAAGAAGACACTAAAAGGGGAGAGACTAATTTGGCTCATATGTCACTGTTAGCCATGATAGGAAAAAAGACACCATCTATGGATCATTTCAGGAACAGGTCGATGCCAGTGATCCGAGCAAGGTTCAGCAAGTGACTATTCATAGCCGAGAGCTGAGATAGGACTAAAGACCAGCATGTTATTATTATGAGGGCTTTCAGGAGCTGTCCGGGGGCCTGGTGTCTCTCTTGTTATCTTCATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_02844117_02844398.mRNA True 2948 mRNA 0.41 1 2843791 2846738

Neighbor

gene id symbol gene type direction distance location
CI01000057_02838008_02838430 NA coding downstream 5329 2836677 ~ 2838785 (-)
CI01000057_02829879_02834139 NA coding downstream 9529 2829834 ~ 2834262 (-)
CI01000057_02807951_02821617 CCDC3B coding downstream 21998 2807766 ~ 2821793 (-)
CI01000057_02710209_02720000 NEK4 coding downstream 122216 2710164 ~ 2721575 (-)
CI01000057_02701515_02705729 GLT8D1 coding downstream 138062 2700883 ~ 2705729 (-)
CI01000057_03027103_03027612 NA coding upstream 180342 3027080 ~ 3027851 (-)
CI01000057_03192667_03213688 NA coding upstream 345764 3192502 ~ 3213869 (-)
CI01000057_03345268_03367172 NA coding upstream 498008 3344746 ~ 3368010 (-)
CI01000057_03428989_03429249 NA coding upstream 581934 3428672 ~ 3430374 (-)
CI01000057_03629306_03634635 NA coding upstream 782188 3628504 ~ 3634635 (-)
G245035 NA non-coding downstream 155926 2687650 ~ 2687865 (-)
G245034 NA non-coding downstream 156691 2686859 ~ 2687100 (-)
G245024 NA non-coding downstream 247274 2596206 ~ 2596517 (-)
G245016 NA non-coding downstream 266559 2576996 ~ 2577232 (-)
G245015 NA non-coding downstream 266902 2576453 ~ 2576889 (-)
G245069 NA non-coding upstream 4082 2850820 ~ 2869408 (-)
G245130 NA non-coding upstream 56327 2903065 ~ 2903273 (-)
G245996 NA non-coding upstream 144254 2990992 ~ 2991334 (-)
G245966 NA non-coding upstream 166525 3013263 ~ 3322256 (-)
G246132 NA non-coding upstream 506694 3353432 ~ 3356706 (-)
CI01000057_01904867_01921400 NA other downstream 922370 1904533 ~ 1921905 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other downstream 1038638 1801528 ~ 1806454 (-)
G244358 NA other downstream 2272763 570530 ~ 571028 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other upstream 1044997 3887203 ~ 3892054 (-)
CI01000057_04927533_04931127 CDK4 other upstream 2082006 4927533 ~ 4931420 (-)
G246780 NA other upstream 2364372 5086312 ~ 5283617 (-)
CI01000057_05925181_05926068 NA other upstream 3076802 5923540 ~ 5927295 (-)

Expression


Co-expression Network