CI01000057_04597494_04597814


Basic Information

Item Value
gene id CI01000057_04597494_04597814
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 4597415 ~ 4597814 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_04597494_04597814.mRNA
ATGATCCAGAACGTCACGAGCCGGAACCCAGCATCTCTCTTCCGGACCATAGTCCACCCAGTCTACCAGGTATTGATGACCTCTACCCCTTCGTCTCAAATTAAGCAGCCGATGTACCGGCAGAGGGGCAGAGGTCTGGGGCTGAAGGGGGGAGCGAATGACAGGCTTGATCTTAGAGACATGAATACCAAGGTGGATATTCTTAAACTGGTTAGTTTGAGTCGAATCGACTCTGGACTGAGCACCTTAGTGATAGAAAATGGTCCAATAAATCGGAAAAGTCTGAGAGGAATGTATTGGGAAGATAACCAGACTCTCTGACCATACACATAAAGTGGGGGCCAGTCTGAGTGAGGGCTTCTCTGGTGATCCTCCACGTAAGGAGGCATCTCTGAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_04597494_04597814.mRNA True 400 mRNA 0.49 1 4597415 4597814

Neighbor

gene id symbol gene type direction distance location
CI01000057_04583096_04590861 ISY1 coding downstream 6554 4582911 ~ 4590861 (-)
CI01000057_04560576_04573644 NA coding downstream 23771 4559640 ~ 4573644 (-)
CI01000057_04543887_04545600 NA coding downstream 51414 4542871 ~ 4546001 (-)
CI01000057_04512368_04525620 COMP coding downstream 71795 4511877 ~ 4525620 (-)
CI01000057_04467496_04467864 NA coding downstream 129414 4467473 ~ 4468001 (-)
CI01000057_04635274_04644405 NA coding upstream 37403 4635217 ~ 4644405 (-)
CI01000057_04647822_04649004 NPFFL coding upstream 49959 4647773 ~ 4649004 (-)
CI01000057_04657451_04663499 NRAMP-BETA, SLC11A2, NRAMP-ALPHA coding upstream 59448 4657262 ~ 4663499 (-)
CI01000057_04718947_04721031 NA coding upstream 121104 4718918 ~ 4721076 (-)
CI01000057_04728914_04731946 NA coding upstream 131058 4728872 ~ 4733723 (-)
G246587 NA non-coding downstream 37978 4557111 ~ 4559437 (-)
G246603 NA non-coding downstream 40405 4556726 ~ 4557010 (-)
G246597 NA non-coding downstream 63047 4532796 ~ 4534368 (-)
G246611 NA non-coding downstream 99746 4487312 ~ 4497669 (-)
G246632 NA non-coding upstream 138 4597952 ~ 4598294 (-)
G246600 NA non-coding upstream 57163 4654977 ~ 4655439 (-)
G246658 NA non-coding upstream 116277 4714091 ~ 4714359 (-)
G246662 NA non-coding upstream 126702 4724516 ~ 4725178 (-)
G246669 NA non-coding upstream 152001 4749815 ~ 4750141 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other downstream 699724 3887203 ~ 3892054 (-)
CI01000057_01904867_01921400 NA other downstream 2675994 1904533 ~ 1921905 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other downstream 2792262 1801528 ~ 1806454 (-)
G244358 NA other downstream 4026387 570530 ~ 571028 (-)
CI01000057_04927533_04931127 CDK4 other upstream 330930 4927533 ~ 4931420 (-)
G246780 NA other upstream 613296 5086312 ~ 5283617 (-)
CI01000057_05925181_05926068 NA other upstream 1325726 5923540 ~ 5927295 (-)

Expression


Co-expression Network