CI01000057_05464070_05466835


Basic Information

Item Value
gene id CI01000057_05464070_05466835
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5464040 ~ 5469344 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_05464070_05466835.mRNA
ACTATATTGATAGATTTGTGTGAGAAATGAACCCATAATTTAGTCATTCACTGAAAACCAGTGAAATGTCATTGTCATGTGACCAAATGAAATTGACATCAAAACTGGTTCCACATTTGAATTGAGAGCTAAAAATTAACTTTATATAATTAAATAGGGATTTGGACAGTTTGAGTGTGCTGTTGATGAACGTTGATAAAGCGATGTTTAGCAGGTTTATGAGGTGACAGACTCATAAAATATAAAATTGCTCTCATTTCCTTCCAACGAAGCTCACTTGAACACACTTCACAGCGTGACTCCTGAACTCTGGAGTAGGAGCGTAGTAGATTTGACTGCTTCCCTGAGCAGCTGTTCACTTCGCTCCTGTCAGAGCGTACAGTATTTTATGTCCCTCAAATACCTGAACACAATGGATCACGCCGCTCTCTGAATGGCCGCTCTGTTCAGCCTCGGCCGGGCCGTTGTGTGTCGAGTGTGTGAAATATGAGACAATGCCTCCTCAAACCCAGTGAGAACCATTTTCCTTTGGTTTTGAGCGAGTCAGAGTGAAGACGAGAGAGGTAACCAGTGAAAAGACCTTTAATCCCCGGCTGGAGAGGACGCTGTGGGGACGAGAGGGAGGTCGATGCAAATGAACGGCGCGGCTTTGAATAACTCCTTCAGCTCTCCAGGAATTCTTGGGAATCCAGCGGTCTGTTAAAGGTTAACTGGCTGTAAAGTTTCAAGCGTTTGCTAGTGTGCTACTGATCCAGTTAGGGGGGGAGTGGGGTAAGATGTGCCGCTCTTTTGCTTTAAGTTGAGAATGAGGAAGAGGTAAAACTAACCATCTGAATGATGTCAAAAGCGTCGTTAACATGCAGACTTTCTGTGGACAAGTTGAATCATTGTAAATGATTAATGAATGATTTATATTCCAAATAACATTTATGAAAGAAAAAACAGATCTAAGCAATCTTCCATGCCAAAGTCTCATTGTGCAGCCAGGAAGAAAGTTTAATATCAACCAAACTTTGGAAACTTCCCCGGCTAAAATCATATAATTTTTTTTTTTTTTTTGTGAAGAAAGCCAAAATATTAAATGAATATTTATGGAGTAATCCACTATTTTGTAGAGGGGGGGCAGAAGAATGACAGTTTCACCTGATATTTGGTGGAGAAAATGACTTTAGAAAGATGGCAGCATCATTATTTTATTTTAGAGAATTTATCAGTAAATTCTGTTGTCTTTTGCAATCCTTCTTGCATTATATACCAGTGGAGACTGTTCAAAAATGGGGAAAAAGCATTTTCGTGTTGTTTTCCCCCTAGAGTTGGCATGCCTGTAACTCAAGATGCCGTCTTAATATCCTTTTAGATTATATATTTAGAAATACGAGCTCTAATCTCCACGTTTGAGCCAGAAAATAACACGGTTGTTATTCTAATAACATTTGGAAATCAGTATATCTAGATTTTACTCATTTAGCACCAGTCCTGTTTAAGTGTGACATTTGTTTTCAGCTCGTGAATCAGTTTAAGTCACCAGCTCTTGCTGCACATAACACCTGACACCACCAGAGGGGAGCAGAGTGTCATTAGAATTCACTTTAGTCGGTTTCATGTGGTCTTGAGTTTAGTTCTATATTAAATGCACGTTTTGTTCTGTGTTGTGTATATTTTATAATATTAATAGTAAGTGACTTTTATTGTGCCAATAGTATATTGGATAAAAATTACAATATTGTTAATTTAAGATTTAATACAGGAGTGGATCGATAAAGAGTTGTCTTCATTTTTAGGAAAGGTTTGAATCCAGAGATATTCCTCCTGTGAATGTTGTTTTATACTTATAGTAACTATTTTAAGATTATAACCTTAGTAGCTACTAGTTTACATTAGACTAGTACTTACTAGTAGAATGATTACAATAATAAAAGCTTCTTAATGAGTAGTAAAAATGGCTATTCAGAAACAAATCTTACAAGAAACATCTGGAACTCCATGGAATTAAGTCGTAGTGCTGAAATAGTTACTTAAAAAAATGTTAAAAATGACTTTCCATAGTAACTTTTCTTTGTTTTGTACATTTCTTTTCCTCTACTATACTCCTCCCCCATTACATGTACCGATTCCCATGCGTTTGGGAGGGGGAAATTCTCGCGGGATTTGGCGAGCGTGCCCAGTGTGAGGAGGAGGCGCGCACAGAGGAGCGCGAGAGCGCGCATCGGACTCATAGCGATCATAGGCTGCGTGTCAGTGCAGTCGACTTACAGCGGGCTGTGAGGAGAACTGGCGCGACCCCTTTGTCCTTAAATACAACTCTTCTCACACGCTAAAACTTCTTAAAGTTTCTTTAAACTCGCGTTAGAGTACTTCTACTCGTTAGGTACTCAAGCAGGTTGGGTTAAACTAGTTATTTTCGCTCTGTTTGAAGTTAAAGGCTGGGCCTTTACACGCGCTCCTGACGAGAGAAAAAGAGAAGCTGCTCTTTCTGCGACTAAAAAGTCCATAAATGCTTTTTACCAAAATGGACCTGTTGAACTACCAGTACTTGGACAAAATGAACAACAACATTGGCATCCTGTGCTACGAAGAGAATTTCCTGAGCACATGGCTAATCTATTACAGCATCGTCCCTGAAAATAGCTCTGTTTCTGCATCGCTTTTTGTCTCTGCCGAGTCAAAACGTGCACAGTGCGGTTTTCTGGTGAAGGACATCGCTTTGCTGAACTTTGCTTTGCGCTTTATCTGGAATCGAGTGAACGCAGCCATTCAAAGGTCGCAGACAAACTTTCTTATCTTTATGTTCATTGATCTTCACACCAAAGATGATTTTGAGGACTCTTTTACCATGAACTGGGAAGATTATAAAAGTTAATGAAAATGTCGTCTTGTGGAAAAAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_05464070_05466835.mRNA True 2890 mRNA 0.39 2 5464040 5469344

Neighbor

gene id symbol gene type direction distance location
CI01000057_05442832_05459768 VGLL4 coding downstream 4272 5442784 ~ 5459768 (-)
CI01000057_05163258_05169859 NA coding downstream 293921 5162640 ~ 5170119 (-)
CI01000057_04927533_04931127 CDK4 coding downstream 532913 4927533 ~ 4931420 (-)
CI01000057_04916382_04926437 ARFGAP1 coding downstream 537603 4916287 ~ 4926437 (-)
CI01000057_04891502_04906844 ELMO2 coding downstream 557196 4890235 ~ 4906844 (-)
CI01000057_05486207_05495209 TAMM41 coding upstream 16696 5486040 ~ 5495657 (-)
CI01000057_05553430_05562372 NA coding upstream 82214 5551558 ~ 5562448 (-)
CI01000057_05633248_05635383 MKRN2OS.2 coding upstream 163871 5633215 ~ 5635898 (-)
CI01000057_05827116_05827514 NA coding upstream 357749 5827093 ~ 5827837 (-)
CI01000057_05830634_05838724 MYBL2, MYBL2B coding upstream 360714 5830058 ~ 5839047 (-)
G246857 NA non-coding downstream 165952 5297832 ~ 5298088 (-)
G246780 NA non-coding downstream 180423 5086312 ~ 5283617 (-)
G246847 NA non-coding downstream 192687 5261892 ~ 5271353 (-)
G246793 NA non-coding downstream 370777 5063388 ~ 5093263 (-)
G246946 NA non-coding upstream 95178 5564522 ~ 5567290 (-)
G246950 NA non-coding upstream 98994 5568338 ~ 5888474 (-)
G246981 NA non-coding upstream 250447 5719791 ~ 5720606 (-)
G247041 NA non-coding upstream 393441 5862785 ~ 5886376 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other downstream 1566349 3887203 ~ 3892054 (-)
CI01000057_01904867_01921400 NA other downstream 3542619 1904533 ~ 1921905 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other downstream 3658887 1801528 ~ 1806454 (-)
CI01000057_05925181_05926068 NA other upstream 454196 5923540 ~ 5927295 (-)

Expression


Co-expression Network