CI01000057_05486207_05495209 (TAMM41)


Basic Information

Item Value
gene id CI01000057_05486207_05495209
gene name TAMM41
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5486040 ~ 5495657 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_05486207_05495209.mRNA
ACGATAGAACATTCCCAGTGGAAGTAAATGCAATTATATACATAAGGAACACAATTATTACTTATGAAGAATTTCACACAGCTTTAGCAGAGTTACAAGTGCATAAATATATAAATTCATAAAATAAACATGAAAGAAAAAAAGTCATTAGATCTTGTTAATTTTCTTGCACCAGACCGCACGGTGGCGCCAGCGAACTATCAACTGCACAACCGACGCTCTTTAGAGCTCGACGATGAAATTGCCATTCAAAAATAGCTGCAGCTAACATCTTTAAAATATTCAGTAGACGAAAAGCATATAGTTATCAATATAATTATTAATCACATTCGTTATTGGCATCACGCATGTGAGTTTGAGCGGCGAACACGATGAGATCTGAACTGAATGAGATGTAAACACACTGACATGATCCCATCAGACGTGAGTTTTGTGTTCATTCTCCGCGATGACGCTTCCAGCTCTACAGAACAGCAGTGTTTTCTACAGGAAGATCCTCAGTAAGTTTCCTCAGGACCTCAGTCTGGCGTTTGCTTATGGATCTGCTGTGTTCAGACAGACTGGAAGCTCTCAAGGTCAGATGACGAGGAACATGCTGGACTTTGTGTTTGCTGTGGATGATCCGGTCACATGGCACACCATGAACCTCATAGAGAACAGGAAGCACTACTCTTTCCTCAGATACCTGGGGCCGAAACACATCAGCAACATACAGAGCGAGTACGGAGCTGGAGTTTACTTCAACACGCTGATTCCTGCTGATGACAGGTTGATGAAGTACGGTGTGATCAGCACGGATGCTCTGATCGATGACTTACTTCACTGGAAAACGCTGTATGTCGCAGGCCGCTTACACAAACCTGTTCGAATTCTGCTCCAGAATGAGAATGGAAAACTGCGGGACGCTCTTGTGGGGAACCTGAAAAGTGCCGTGATTGCTTCTTTTCTCATGCTGCCAGAAAGTTGTTCAGAAGAAGACCTTTTCCTCCAGATAGCAGGACTGTCCTACTCTGGGGATTTCAGGATGGTGATTGGTGAGGATAAAGCCAAAGTCTCCAACATCGTAAAAGACAACATGCAGCATTTCCGCAAGTTATACAACAATATTCTTCAAGAGTGCCCGCAGGTGGTGTACAAGCCTCAACAGGGCCGGCTGGAGGAGAATCCCTGTGGATTGACTGAGTTCAGCTGCTGTCTGATATTAGGCAGGTTTCTGATGGACGCTAAGGGCTTGGGACTTTACTCTCTCGTGGACAAAAGCCCCGAGGGTCAGTTCACGCAGCTCATGGCTCTTCCACGCACTCTTCAGCAGCAGATCACGCGTCTGGTGGACCGTCCGGGGAAGAACAGGGATGTGGAGGAGATCCTCCTGCAGGTGGCGCAGGACCCAGACTGCGGCTCCGTCGTACAGCAAGGAATTTCTTCGATAGTGAAAACCTCCAGCCTAACACAGAGCGCCAAAGGAATCGCCACCGCTGCAAGTGAAACGTGTTTTACAGGTCCCGTCAAAACGGTGTCGTACAGCGTAAAAAAGCTGCAGAAAATGTGGAGAGGCTGGCGTAGAAAACCATCGTGACTGACAATTATTTCTAAACGCATTTCACAATGACTGTGTCAAACATTTCCACCTTGCTTTCCATAGTTGATATTTATTTACAGTCCAAGTATGAAAGTGTGTTGTATGTTTAACTGAAGCAGTGTATACTCATCAATGCACAGTATTCCTGAGAAAATGTCAATAAA

Function

symbol description
tamm41 Predicted to enable phosphatidate cytidylyltransferase activity. Predicted to be involved in CDP-diacylglycerol biosynthetic process and cardiolipin biosynthetic process. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be located in mitochondrial inner membrane. Predicted to be extrinsic component of mitochondrial inner membrane. Predicted to be active in mitochondrion. Is expressed in heart and heart tube. Orthologous to human TAMM41 (TAM41 mitochondrial translocator assembly and maintenance homolog).

GO:

id name namespace
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG:

id description
K17807 TAM41, MMP37; mitochondrial translocator assembly and maintenance protein 41

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_05486207_05495209.mRNA True 1743 mRNA 0.45 9 5486040 5495657

Neighbor

gene id symbol gene type direction distance location
CI01000057_05464070_05466835 NA coding downstream 16696 5464040 ~ 5469344 (-)
CI01000057_05442832_05459768 VGLL4 coding downstream 26272 5442784 ~ 5459768 (-)
CI01000057_05163258_05169859 NA coding downstream 315921 5162640 ~ 5170119 (-)
CI01000057_04927533_04931127 CDK4 coding downstream 554913 4927533 ~ 4931420 (-)
CI01000057_04916382_04926437 ARFGAP1 coding downstream 559603 4916287 ~ 4926437 (-)
CI01000057_05553430_05562372 NA coding upstream 55901 5551558 ~ 5562448 (-)
CI01000057_05633248_05635383 MKRN2OS.2 coding upstream 137558 5633215 ~ 5635898 (-)
CI01000057_05827116_05827514 NA coding upstream 331436 5827093 ~ 5827837 (-)
CI01000057_05830634_05838724 MYBL2, MYBL2B coding upstream 334401 5830058 ~ 5839047 (-)
CI01000057_05842522_05847302 IFT52 coding upstream 346662 5842319 ~ 5847302 (-)
G246857 NA non-coding downstream 187952 5297832 ~ 5298088 (-)
G246780 NA non-coding downstream 202423 5086312 ~ 5283617 (-)
G246847 NA non-coding downstream 214687 5261892 ~ 5271353 (-)
G246793 NA non-coding downstream 392777 5063388 ~ 5093263 (-)
G246946 NA non-coding upstream 68865 5564522 ~ 5567290 (-)
G246950 NA non-coding upstream 72681 5568338 ~ 5888474 (-)
G246981 NA non-coding upstream 224134 5719791 ~ 5720606 (-)
G247041 NA non-coding upstream 367128 5862785 ~ 5886376 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other downstream 1588349 3887203 ~ 3892054 (-)
CI01000057_01904867_01921400 NA other downstream 3564619 1904533 ~ 1921905 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other downstream 3680887 1801528 ~ 1806454 (-)
CI01000057_05925181_05926068 NA other upstream 427883 5923540 ~ 5927295 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003120 tamm41 coding NC_007122.7 CM002895.2 779754 ~ 790304 (+)