Gene
RNA
| Item | Value |
|---|---|
| gene id | G244338 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 479943 ~ 480154 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Transposable element Tc1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU277348 | True | 212 | lncRNA | 0.55 | 1 | 479943 | 480154 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_00475661_00476027 | NA | coding | downstream | 3916 | 475392 ~ 476027 (-) |
| CI01000057_00459703_00467870 | ABHD6A, ABHD6 | coding | downstream | 12073 | 458943 ~ 467870 (-) |
| CI01000057_00420698_00421063 | NA | coding | downstream | 58880 | 419986 ~ 421063 (-) |
| CI01000057_00409300_00412579 | NA | coding | downstream | 67318 | 409168 ~ 412625 (-) |
| CI01000057_00400397_00400972 | NA | coding | downstream | 78929 | 400057 ~ 401014 (-) |
| CI01000057_00534471_00559759 | NA | coding | upstream | 53434 | 533588 ~ 559759 (-) |
| CI01000057_00561471_00562830 | NA | coding | upstream | 81075 | 561229 ~ 562857 (-) |
| CI01000057_00628126_00628851 | NA | coding | upstream | 147561 | 627715 ~ 630166 (-) |
| CI01000057_00873279_00873578 | NA | coding | upstream | 393120 | 873274 ~ 873578 (-) |
| CI01000057_00938618_00949690 | NA | coding | upstream | 457917 | 938071 ~ 949779 (-) |
| G244287 | NA | non-coding | downstream | 64334 | 413912 ~ 415609 (-) |
| G244305 | NA | non-coding | downstream | 72114 | 407220 ~ 407829 (-) |
| G244304 | NA | non-coding | downstream | 73970 | 405583 ~ 405973 (-) |
| CI01000057_00339874_00343207 | MRTO4 | non-coding | downstream | 136248 | 339811 ~ 343695 (-) |
| G244339 | NA | non-coding | upstream | 43 | 480197 ~ 480417 (-) |
| G244359 | NA | non-coding | upstream | 94382 | 574536 ~ 574885 (-) |
| G244360 | NA | non-coding | upstream | 95713 | 575867 ~ 576145 (-) |
| G244367 | NA | non-coding | upstream | 150966 | 631120 ~ 631439 (-) |
| G244370 | NA | non-coding | upstream | 152422 | 632576 ~ 632905 (-) |
| G244358 | NA | other | upstream | 90376 | 570530 ~ 571028 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | upstream | 1321430 | 1801528 ~ 1806454 (-) |
| CI01000057_01904867_01921400 | NA | other | upstream | 1439902 | 1904533 ~ 1921905 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | upstream | 3411581 | 3887203 ~ 3892054 (-) |
| CI01000057_04927533_04931127 | CDK4 | other | upstream | 4448590 | 4927533 ~ 4931420 (-) |
