G244391


Basic Information

Item Value
gene id G244391
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 837561 ~ 838099 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU277420
GTCAAACTCGCTCAAATCCTTACGCTTGCCCATTTTTCCTGCTTCCAACACATCAACTTTGAGGACAAAATGTTCACTTGCTGCCTAATATATCCCACCCACTAACAGGTGCTGTGATGAAGAGATAAAATCAGTGTTATTCACTTCACCTGTCGGTGCTCATAATGTTATGCCTGATTGGTGTATATACTGACAGTTAACAGGCTATCTCATGGTCTATCAGAATATTAATGTTACACCAGCCATTGACCATGAGATGCAAACATAAATCAAGAGGAGACTAATTTACCCCAACCCAGGGTTCTTGTGCAGCTGATTAACCTTAACTTGACTCTATCCACTGAAGCAGCGGAAGGCCAAGGACATTAGACCTGGAATACGGAAGTACACCTGTACCATTATACAGTACTAGAGAGTGTCAACTGAGTATAAATGAATGCGAATAAATGGGTGTCTTTCACTCAGTGTCCGTTATTGACAATAACCCCAGATGGCCATTTCCATTCATACTGCCCCTATCTACCAAAAAAGAAATCTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU277420 True 539 lncRNA 0.41 1 837561 838099

Neighbor

gene id symbol gene type direction distance location
CI01000057_00628126_00628851 NA coding downstream 207395 627715 ~ 630166 (-)
CI01000057_00561471_00562830 NA coding downstream 274704 561229 ~ 562857 (-)
CI01000057_00534471_00559759 NA coding downstream 277802 533588 ~ 559759 (-)
CI01000057_00475661_00476027 NA coding downstream 361534 475392 ~ 476027 (-)
CI01000057_00459703_00467870 ABHD6A, ABHD6 coding downstream 369691 458943 ~ 467870 (-)
CI01000057_00873279_00873578 NA coding upstream 35175 873274 ~ 873578 (-)
CI01000057_00938618_00949690 NA coding upstream 99972 938071 ~ 949779 (-)
CI01000057_00956994_00965947 NR1D4B coding upstream 117534 955633 ~ 965947 (-)
CI01000057_01083731_01092073 NA coding upstream 245615 1083714 ~ 1092631 (-)
CI01000057_01145522_01147560 NA coding upstream 305963 1144062 ~ 1147772 (-)
G244380 NA non-coding downstream 77717 753930 ~ 759844 (-)
G244370 NA non-coding downstream 204656 632576 ~ 632905 (-)
G244367 NA non-coding downstream 206122 631120 ~ 631439 (-)
G244360 NA non-coding downstream 261416 575867 ~ 576145 (-)
G244359 NA non-coding downstream 262676 574536 ~ 574885 (-)
G244462 NA non-coding upstream 36 838135 ~ 839154 (-)
G244463 NA non-coding upstream 2697 840796 ~ 841279 (-)
G244465 NA non-coding upstream 7743 845842 ~ 847479 (-)
G244386 NA non-coding upstream 29640 867739 ~ 868213 (-)
G244392 NA non-coding upstream 30847 868946 ~ 869899 (-)
G244358 NA other downstream 266533 570530 ~ 571028 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other upstream 963485 1801528 ~ 1806454 (-)
CI01000057_01904867_01921400 NA other upstream 1081957 1904533 ~ 1921905 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other upstream 3053636 3887203 ~ 3892054 (-)
CI01000057_04927533_04931127 CDK4 other upstream 4090645 4927533 ~ 4931420 (-)
G246780 NA other upstream 4373011 5086312 ~ 5283617 (-)

Expression


Co-expression Network