Gene
RNA
| Item | Value |
|---|---|
| gene id | G244379 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 933900 ~ 935859 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| type II inositol 1,4,5-trisphosphate 5-phosphatase-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU277402 | True | 1960 | lncRNA | 0.34 | 1 | 933900 | 935859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_00873279_00873578 | NA | coding | downstream | 60322 | 873274 ~ 873578 (-) |
| CI01000057_00628126_00628851 | NA | coding | downstream | 303734 | 627715 ~ 630166 (-) |
| CI01000057_00561471_00562830 | NA | coding | downstream | 371043 | 561229 ~ 562857 (-) |
| CI01000057_00534471_00559759 | NA | coding | downstream | 374141 | 533588 ~ 559759 (-) |
| CI01000057_00475661_00476027 | NA | coding | downstream | 457873 | 475392 ~ 476027 (-) |
| CI01000057_00938618_00949690 | NA | coding | upstream | 2212 | 938071 ~ 949779 (-) |
| CI01000057_00956994_00965947 | NR1D4B | coding | upstream | 19774 | 955633 ~ 965947 (-) |
| CI01000057_01083731_01092073 | NA | coding | upstream | 147855 | 1083714 ~ 1092631 (-) |
| CI01000057_01145522_01147560 | NA | coding | upstream | 208203 | 1144062 ~ 1147772 (-) |
| CI01000057_01189209_01190703 | SMUG1 | coding | upstream | 253054 | 1188913 ~ 1190703 (-) |
| G244475 | NA | non-coding | downstream | 61903 | 871777 ~ 871997 (-) |
| G244392 | NA | non-coding | downstream | 64001 | 868946 ~ 869899 (-) |
| G244386 | NA | non-coding | downstream | 65687 | 867739 ~ 868213 (-) |
| G244465 | NA | non-coding | downstream | 86421 | 845842 ~ 847479 (-) |
| G244463 | NA | non-coding | downstream | 92621 | 840796 ~ 841279 (-) |
| G244516 | NA | non-coding | upstream | 15855 | 951714 ~ 952007 (-) |
| G244522 | NA | non-coding | upstream | 65264 | 1001123 ~ 1001347 (-) |
| G244524 | NA | non-coding | upstream | 72379 | 1008238 ~ 1029028 (-) |
| G244594 | NA | non-coding | upstream | 229317 | 1165176 ~ 1167492 (-) |
| G244558 | NA | non-coding | upstream | 257086 | 1192945 ~ 1193239 (-) |
| G244358 | NA | other | downstream | 362872 | 570530 ~ 571028 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | upstream | 865725 | 1801528 ~ 1806454 (-) |
| CI01000057_01904867_01921400 | NA | other | upstream | 984197 | 1904533 ~ 1921905 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | upstream | 2955876 | 3887203 ~ 3892054 (-) |
| CI01000057_04927533_04931127 | CDK4 | other | upstream | 3992885 | 4927533 ~ 4931420 (-) |
| G246780 | NA | other | upstream | 4275251 | 5086312 ~ 5283617 (-) |
