Gene
RNA
| Item | Value |
|---|---|
| gene id | G244522 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 1001123 ~ 1001347 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU277562 | True | 225 | lncRNA | 0.48 | 1 | 1001123 | 1001347 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_00956994_00965947 | NR1D4B | coding | downstream | 35176 | 955633 ~ 965947 (-) |
| CI01000057_00938618_00949690 | NA | coding | downstream | 51344 | 938071 ~ 949779 (-) |
| CI01000057_00873279_00873578 | NA | coding | downstream | 127545 | 873274 ~ 873578 (-) |
| CI01000057_00628126_00628851 | NA | coding | downstream | 370957 | 627715 ~ 630166 (-) |
| CI01000057_00561471_00562830 | NA | coding | downstream | 438266 | 561229 ~ 562857 (-) |
| CI01000057_01083731_01092073 | NA | coding | upstream | 82367 | 1083714 ~ 1092631 (-) |
| CI01000057_01145522_01147560 | NA | coding | upstream | 142715 | 1144062 ~ 1147772 (-) |
| CI01000057_01189209_01190703 | SMUG1 | coding | upstream | 187566 | 1188913 ~ 1190703 (-) |
| CI01000057_01219430_01223491 | HNRNPA1, HNRNPA1A | coding | upstream | 218083 | 1219430 ~ 1223491 (-) |
| CI01000057_01235433_01244747 | NA | coding | upstream | 233830 | 1235177 ~ 1245182 (-) |
| G244516 | NA | non-coding | downstream | 49116 | 951714 ~ 952007 (-) |
| G244379 | NA | non-coding | downstream | 65264 | 933900 ~ 935859 (-) |
| G244475 | NA | non-coding | downstream | 129126 | 871777 ~ 871997 (-) |
| G244392 | NA | non-coding | downstream | 131224 | 868946 ~ 869899 (-) |
| G244386 | NA | non-coding | downstream | 132910 | 867739 ~ 868213 (-) |
| G244524 | NA | non-coding | upstream | 6891 | 1008238 ~ 1029028 (-) |
| G244594 | NA | non-coding | upstream | 163829 | 1165176 ~ 1167492 (-) |
| G244558 | NA | non-coding | upstream | 191598 | 1192945 ~ 1193239 (-) |
| G244606 | NA | non-coding | upstream | 195225 | 1196572 ~ 1196835 (-) |
| G244548 | NA | non-coding | upstream | 207151 | 1208498 ~ 1210749 (-) |
| G244358 | NA | other | downstream | 430095 | 570530 ~ 571028 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | upstream | 800237 | 1801528 ~ 1806454 (-) |
| CI01000057_01904867_01921400 | NA | other | upstream | 918709 | 1904533 ~ 1921905 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | upstream | 2890388 | 3887203 ~ 3892054 (-) |
| CI01000057_04927533_04931127 | CDK4 | other | upstream | 3927397 | 4927533 ~ 4931420 (-) |
| G246780 | NA | other | upstream | 4209763 | 5086312 ~ 5283617 (-) |
