XLOC_010079 (oprd1b)


Basic Information

Item Value
gene id XLOC_010079
gene name oprd1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 34160835 ~ 34174260 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020031
GACTAGTGGAGTTGATGTCCTTAAATCTGCTGCTCATGATCTTACACctttcattttaaacaaacactTTCAACATTTTACAGTTTCACTTAATTAGAAGGCGTTCGACATATAGGGGACGAGCATAATGGAGCCTCCAACAGTGACTGTCAGCGATTTTTCCGAGCGTTATCCTTTATTTCTGCACAACTCGAGCTTTCTGGAGGAGCCTGCGGGACTTCTGTCCAACTGGAGCGGAGGAAGCAGTGAGCTGAAGGCGGTGAGAGGCAGCAGTGCGGTCGCTATCGCTGTCTCCATCACTGCGCTATACTCGGTCATCTGCGTTGTGGGACTCGTTGGAAATGTGCTGGTTATGTACGGAGTGGTCAGGTACACGAAGATGAAAACCGCAACCAACATATACATCTTCAACCTGGCATTAGCAGATGCGTTGGCCACCAGTACATTGCCCTTCCAGAGCGCCAAATACCTCATGGGCACCTGGCCGTTCGGCGAGCTCTTGTGTAAAGTGGTCATTGCTATTGACTATTACAACATGTTTACCAGTATTTTCACGCTGACGATGATGAGTGTGGACCGCTATATTGCCGTGTGTCATCCGGTGAGGGCCCTGGACTTCCGCACGCCTGTCAAAGCCAAGATCATCAACATCTGCGTCTGGATTCTGTCCTCCGCTGTCGGCTTCCCCGTCATGGTGATGGCTGTTACTAAAGAATTAGACTCAGGCAAAACAATCTGCATGCTGAAATTCCCCGACCCAGAATGGTACTGGGATACAGTGACCAAAATCTGcgtttttatttttgcctttgtGTTTCCCGTCCTGGTGATCACCGTCTGCTACGGCCTGATGATCCTGCGGCTGAAGAGCGTGCGCCTGCTCTCCGGCTCCAAAGAGAAGGACAGGAACCTCCGGCGCATCACCCGCATGGTTTTAGTGGTGGTGGCGGCATTCATCATCTGCTGGACCCCCATCCACATCTTCATCATCGTCAAGACAGTGGTAGAGATCGACCAGAAGAACCTGCTGGTGGTGGCCTGCTGGCATCTGTGCATCGCTCTGGGCTACATGAACAGCAGCCTCAACCCGGTCCTCTACGCTTTTCTAGATGAGAACTTCAAGAGGTGCTTCAGAGAGTTCTGCTTGCCTTTTCGCACTCGCATAGAGCAGAACAGCTTTTCCAAAGCCCGCAGCGTCATCAGAGAGCCCATCTCTGTCTGCGCCAAATCAGAATCAATCAAGCAGCCCACATGACTAGACCTGGACCGGATGACTCCTAGTACACAGAAAGACCCGCAGTCCGAGGTAACCCAGATCTCTACAACTGAGTTTTAAGCTTATCTGGCCCATAAACTGCTGGCAGAATGTCATGTTGGggcattatttatattttattctcaTCGTTCTTGACTGAAAAGTATGGATGGCCCTGAAATGATCTGCGAGATATTTTCCTAAGTGAGGAAATGAGATGATCTGGACCATCAAGATGGTAATCATGCATTGGAAAAGACATCAAAGACCTGACCAACAGGAAATTTACATTCATTAGTGGTATATGAGCCAATACAGCAGATTCCcctaatgagattttttttatattgcaagTTAATGCATTTCCATGGGAATTGTGGGATTTTATGATACATTGAATAATCAATTCTGCTTTTGAAACAACAAAGTGAGCTGTAAGATTTTTCTTACAAGAGCTTGTTACACAGAAAGatgaaaatgtacagtttttgaGCTCCTGTTGTAgacaataaaagttttttttttttcttaaaaaccaAGACATATGGAGAAACATTGGACTTTAGAATGGACATTCCCTTTGATTTTCATGGATGTCAGCGGATGTTCTTCCTTTTGAAAACATAAACTCTGAGCATTATTCATTTCATGGTGCTTTATAAAGTCAGTTTGTAAATTTGCGCTACTAGTGAAGGTGTTTTAAAACCTTTGACTATGAAGAAACGTTTTTAGCTCTTTTAGTATTTAGTGGACGAAAATCTTGCATTTCTTTGCCATTGGCGCAGAATGGCTGTTTTTATGACCTTCTTCAAATTCTAAAgttgaagtgacatttaacgaATCGTCTCATGATGTTAGTGTTGGATTTAAAATGTCAGCTTTGCTGTAAAAGGAGATGGTTTAGTTTCTTGAGCTGTAATAGGTAAACTTTTTTCCAGCCAAGTGTGTTTATGTATTAGTTTTGCTTTCCTGTATTCTGCTTCAGTGATCTGTTCTCATGAATCTATTTTTATGGACGCATGGAAATTAGACATCACAAACTATCTGATCTGTCAGTATTTGTTGTGAAAGttcagaaaaaataattaaaatcattcTGTAGATTAA

Function

symbol description
oprd1b Enables G protein-coupled enkephalin receptor activity and morphine receptor activity. Acts upstream of or within G protein-coupled opioid receptor signaling pathway. Is integral component of plasma membrane. Is expressed in several structures, including central nervous system; notochord; prechordal plate; swim bladder bud; and trunk. Orthologous to human OPRD1 (opioid receptor delta 1).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007218 neuropeptide signaling pathway biological_process
GO:0038003 opioid receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0043005 neuron projection cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0038046 enkephalin receptor activity molecular_function
GO:0038047 morphine receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0042277 peptide binding molecular_function
GO:0004985 opioid receptor activity molecular_function
GO:0042923 neuropeptide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8473 Enables G protein-coupled enkephalin receptor activity and morphine receptor activity. Acts upstream of or within G protein-coupled opioid receptor signaling pathway. Is integral component of plasma membrane. Is expressed in several structures, including central nervous system; notochord; prechordal plate; swim bladder bud; and trunk. Orthologous to human OPRD1 (opioid receptor delta 1).

Ensembl:

ensembl_id ENSDARG00000037159

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020031 True 2362 mRNA 0.43 3 34160835 34174260

Neighbor

gene id symbol gene type direction distance location
XLOC_010078 tcea3 coding upstream 25591 34111919 ~ 34135244 (+)
XLOC_010077 tent5ba coding upstream 104392 34046733 ~ 34056443 (+)
XLOC_010076 zdhhc18a coding upstream 154500 33992319 ~ 34006335 (+)
XLOC_010075 pigv coding upstream 170111 33987892 ~ 33990724 (+)
XLOC_010074 arid1aa coding upstream 174039 33953644 ~ 33986796 (+)
XLOC_010080 NA coding downstream 141502 34315762 ~ 34321379 (+)
XLOC_010081 NA coding downstream 145629 34319889 ~ 34323007 (+)
XLOC_010082 NA coding downstream 304737 34478997 ~ 34502203 (+)
XLOC_010083 paqr7b coding downstream 348717 34522977 ~ 34532888 (+)
XLOC_010084 stmn1b coding downstream 349255 34523515 ~ 34527206 (+)
XLOC_010070 BX530064.2 non-coding upstream 404456 33752102 ~ 33756379 (+)
XLOC_010067 AL954832.1 non-coding upstream 817570 33343151 ~ 33343265 (+)
XLOC_010066 NA non-coding upstream 867055 33250490 ~ 33293780 (+)
XLOC_010065 NA non-coding upstream 946298 33180106 ~ 33214537 (+)
XLOC_010060 NA non-coding upstream 1097676 33058899 ~ 33063159 (+)
XLOC_010085 AL929184.1 non-coding downstream 550308 34724568 ~ 34724682 (+)
XLOC_010086 NA non-coding downstream 739024 34913284 ~ 34916253 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location