Gene
RNA
| Item | Value |
|---|---|
| gene id | G245035 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 2687650 ~ 2687865 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU278170 | True | 216 | lncRNA | 0.43 | 1 | 2687650 | 2687865 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_02624690_02627558 | GATA2 | coding | downstream | 57428 | 2624461 ~ 2630222 (-) |
| CI01000057_02621058_02622618 | NA | coding | downstream | 64801 | 2620915 ~ 2622849 (-) |
| CI01000057_02457005_02470094 | NA | coding | downstream | 217556 | 2456813 ~ 2470094 (-) |
| CI01000057_02439034_02454810 | NA | coding | downstream | 232840 | 2437622 ~ 2454810 (-) |
| CI01000057_02421510_02433767 | NA | coding | downstream | 253883 | 2421224 ~ 2433767 (-) |
| CI01000057_02701515_02705729 | GLT8D1 | coding | upstream | 13018 | 2700883 ~ 2705729 (-) |
| CI01000057_02710209_02720000 | NEK4 | coding | upstream | 22299 | 2710164 ~ 2721575 (-) |
| CI01000057_02807951_02821617 | CCDC3B | coding | upstream | 119901 | 2807766 ~ 2821793 (-) |
| CI01000057_02829879_02834139 | NA | coding | upstream | 141969 | 2829834 ~ 2834262 (-) |
| CI01000057_02838008_02838430 | NA | coding | upstream | 148844 | 2836677 ~ 2838785 (-) |
| G245034 | NA | non-coding | downstream | 550 | 2686859 ~ 2687100 (-) |
| G245024 | NA | non-coding | downstream | 91133 | 2596206 ~ 2596517 (-) |
| G245016 | NA | non-coding | downstream | 110418 | 2576996 ~ 2577232 (-) |
| G245015 | NA | non-coding | downstream | 110761 | 2576453 ~ 2576889 (-) |
| G244982 | NA | non-coding | downstream | 273465 | 2413937 ~ 2414185 (-) |
| G245069 | NA | non-coding | upstream | 162955 | 2850820 ~ 2869408 (-) |
| G245130 | NA | non-coding | upstream | 215200 | 2903065 ~ 2903273 (-) |
| G245996 | NA | non-coding | upstream | 303127 | 2990992 ~ 2991334 (-) |
| G245966 | NA | non-coding | upstream | 325398 | 3013263 ~ 3322256 (-) |
| CI01000057_01904867_01921400 | NA | other | downstream | 766229 | 1904533 ~ 1921905 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | downstream | 882497 | 1801528 ~ 1806454 (-) |
| G244358 | NA | other | downstream | 2116622 | 570530 ~ 571028 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | upstream | 1203870 | 3887203 ~ 3892054 (-) |
| CI01000057_04927533_04931127 | CDK4 | other | upstream | 2240879 | 4927533 ~ 4931420 (-) |
| G246780 | NA | other | upstream | 2523245 | 5086312 ~ 5283617 (-) |
| CI01000057_05925181_05926068 | NA | other | upstream | 3235675 | 5923540 ~ 5927295 (-) |
