XLOC_010095 (map7d1a)


Basic Information

Item Value
gene id XLOC_010095
gene name map7d1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 35661331 ~ 35776074 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020054
TAGACTTAACAGTATGAGAATTCAACTTTTACTCAAGTTGTAGGCATGTAATACAATCTGTAGTTTCAATTTCAGTTTCTCAACAGAGAAAGAAATCCTAACTAAATAATCTTTCTATAATAAAACAAGTCTTAAGTCCATTGAGTCTCAAACATTTCGAAGTCGCAGGCCGGCGAAACCTTCTGTGGAAAAACAGGTTAGACTGGTAAAATATAATACAGTGTTTAAAGGATTCAAGCTTTTGAAGtcacaaaaacaaaagtatattgttttaaattcattGTAACTCTTCTGAAGTTTCTAAATCGTATTAATAAACCAGTGTCTGTAATTATGGACTACTTTAATTCTAAATCCACCCCTATGTACAATGTGGTATATTCCATACCGGAGGCCGAGTTGGGACGGTCTTCGGTTCACAATGAGCTGCATGCCATCACCTTCAGAGCGGCAGAGGGAGCACACAGAGTCCGcatccgctgtgtgtgtgtgtgtcagaaactTTATACAGTCTCACCGCTCCACGAGGCCAGGACAAATATACAGTTTTCTGACTGGACTTTAAACAAGGGCTCTACATGCATCCATCGTATCCATAATATTTTCCCGCAAGACCCTTCGGCTCGGCTGAGTGTTTTGGGGATTTTTATACGCTCAGGAGAAATTGGGATCGGTTTCTCGTGCCTGTGGAAATCCGGTGTTATCGAAGAAAGTTTCTCCCTGTCTCACGGaaggaatgaatacattttagaaaGAAATATCCGCATGATTTAAAGGGATAAAAACATGGAATTCAACCATATCGACACACAATCTGGATTAAATCAGATGACACCCTCAGAAACACATCCCCCAGCTGTTTCAGAGACCAATCAGAGCGATCCCTGTTCAGAGGAAGTTATCCCTTCTTCAAGAACAGAATTGGGCCTTGATGCTGGCACACCTACAAAGATGGATGCCGCACAGAAGCCATCTACTCCAACGCAACCAGACGTCATTCCAAAGTCCCCCGCGAGGTCAAGCGGTAGCCTTCACCCCAAGAAAGatgGAATGAAGTATGATGAACGGCAGAAACAGGCTAAGGAGAGGAGAGAGGAAAAAGCCAAATATCTCGAACAGCGTAGCCAGACTCAAGCTGCTAAAAAGTCCCAGTGGCTGGAGAAGGAGGAACGGGCACGGCAGGTCCGGGAACAGCAGCTGGAGGAGCGAAGGAGGAAGCTGGAGGAGCAGCGGCTGAAGGCAGAGAGACGCCGGGCAGAGCTGGAGGACAGACAGAAACAGAAACTGGAGAAGAACAAGGAGCGATATGAGGCGGCCATCCAGAGGTCTGGTAAGAAGACGTGGGCAGAGATCCGGCAGCAGAGATGGTCCTGGGCCGGAGGCTTAAGCGGCAACTCCAGCCAGAGTCAGAGCAGATGCTCAATATCAGCGGTCAACCTGCCCAAACATGTGGACTCAGTCATAAACAAGAGGCTCTCCAAATCCTCTGCCACTCTCTGGAACACCCCTAGCAGAACTCGCAGCTTGCAGTTAAGTCCATGGGAGAGCAGCATTGTGGACAGACTGATGACACCCACTCTCTCCTTCTTGGCTCGCAGTCGCAGTGCCGCCAGTGTGCTGAACAACTCCAGAGATGCCCAGTCTCCATTGTGCCCACGCTCAGCGTCTGCCAGTCCTCTGTCAGTATGTGCTCATCGGCCTCACCGCTGCTCTGAGCGCTGGAGGGTCACCACCAGCACACCTGATATCACCCAGCGCAGGCGAGACTCCACACCTTTGAGGAAGGATAAGAAGGACAaggagagagaaaatgaaaaggaGAAGAATAGCATCACCAAAGAGAAGGTGCTGAAGAAGAGACAGTCCATGCCTTCAATCAAAACCAGAATAGAGTCCAGTCCGAGTCCAGTGTTTAAACTGAGATCTGCATCTCCTGCTACGCCCAAGGCTCGTGTGTCGTCCCCAAGTCCTGCAGTGTCTCCTAAACCTCCAGCAGCACAAGCAAGCCCCATGACTCCTAAAGCCCGCCCCAAAAGAGCCAGGACCCCTGCCCGTGTGGAGACCCGCACCGCCTCTCCTGTTGCCATCGATAGGGTTCGAGAGCCCCGTAGGCCGGCTACACCCGAACAACCAAAGACCTCGTCTCCTGTCCCCTCTATTGTGGTGTCATCAGTCCTGGACACGCCCCCTGTCACCAGTGCTCCAATGGTGTCGGTTTCTGCGTCCCCTGTGCCCGAGGACTCTCCTCTTGTCTCCGCCCTCCCGCAGGTGTCCTCTCCAGCGCCCTCTCCTGGCAAACCCATGGCTGGCACAAACAACCCAGAGGAGGCCACCCGCATCTTGGCTGAGAAGAGACGACAGGCTCGCGAACAGAgagagaaggaggaggaagaacGGAGAGAACAGCTGGAGAGAGAGAGAATTCAGCGTGAGGAAAGGCTGGTGCAGGAGGCCGAGGAGAGGAAGCGCAGGGAGGAAGAGGCTCGGCTGATGGCGGAGCAGGAGAAGTTAAGAGAGGAAGCCCGGCGCCTACAGGAGGAGGAGGCAGCACTGGAAAGAGCCAAAATTGAACAAGAAGAGAACGAACGCCTTCAGAAACAGAAAGAGGAGGCTGAAACAAAGGCCAAAGAGGAAGCCGAGAAGCAGCGCCTGGAGCGAGAGAAACACTTCCAAAAGGAGGAGCAGGAGAGGCTGGAGAGAAAGAAGCGTCTGGAGGAGATTATGAAAAGAACACGAAAAACAGATGCCGCAGAGAAGAAAGACTCGACAAGTCCAGCTCAAGTCAATGGGAAAGATTCAGAGAtgaataaagCAGCTGCCGACTACCAGCCAAACACAGCACTGAAACAAGATGGTGTGAACGAAAGtctgTCTGTTCCTGTGTTGAACGGCATTCAGACTTCCAAACACGAGAATGGCCTGTCAGCAAAAGGAGAGGCATCTCAGTTCGAAGAGATCCTTCAGCTGTCCAATCACAACAACGGGCGGGAGAAATCGGAGTCTGACAGACCCGATGAGCCAATCATGGCCTTCGAAAGCAGCGAATCATTCCTAAAAAAAACAGGCCCCCTTAAGCCTCAGCATGTGGCAGAGGTCCTCTGAGGTCTTAAACTTTAGGATAAAGCCTTAAACCTGCAAGTCCCTCACCCCCGTCTGCCTGAGGGACCCGATGGAAAGAAGCACAGCATGAAGGAGACCTGTGCCAAACCCAAAAACTGTCTTCTGTTTAGACTGTACAGAGCAACCCTTGCTCACGGTGCATGATGGAAAATACACAACAATCAAGCCGAGCTGAACTGCACCAGAATCACTATCCATCAGAcccgatcacacacacacacttcaccacGATACAACATCATGTTtagtttttctaaaaaaaaaagagagaaagcttCTGATAAACTTTAATCCTTGTCGTTATTCATGCTTTTGTGGGCAGATTGGAGAAGTGCTTtgggtgttttatttttcagtgtttagTTATTTAACTGGAAGAGAATTGTAACTACTGGGTACAGTTGTATGTGAATAATGTAAATTGGACAATGGGAGGAGAGGATCTGTGAATAAAACAGAATGAAAGGGGCTGGCGTTTTGTGATTCATTTTGTCCGACTGTAACCATTTTGCGTCAGGTTTTTGATTTCTGCCTAGTTGTCTACTTGCATAATAAACGCCCAAAAGATGTCACATGCCAGATTGACTCTGCATTCAACTCCAATGTCAAGTTTATAGGAAATTGTTGGAACATTTTTTCCCATTGTTGCCAAGTTAAACCATTTTATAGCTACTCTGGACCTCTTTTAGACTGCGAGAGTTCAAAATCTTAGTTTTGGATATTGGTGTAAACCATAGGCTGTAAAATATAGGGTGTACAATTGTGGGCCATTCTGAGGAGCTGAAATCAAGCATATTTTATGGATGACCCCATTGAAACAAAGTCACTCTGGACTGGAGTAATACATAATATGCTGGATAAATAcgtggcttttttttttccatacatATTTGGTGAAAGTCATTTTAGTAAGTCAAAAATGTTAAAGTCAAGCTTATGTTCAGAAACTGTAGAAATAATTCTCTTATGGGTATTTTCCTTTAATTTTCAGCTGAAAACTCCAAACATTCATAAATTGAGATAAAAGTAAAAATTGTGCTCTAGAAAATTTCCACTAAGTTTGATTGTTGATTATTCTCTCACATTCTAAGACAGATTCCCAAACTAGagcctgtgggccaaagttggcccactgTAACTTTGAATTGGCCAAACATCCCATATGAGAGGAGAGTATGATGAAGAGGGTTGATTTCTGGAGAGGGGAGATTTCTGACTTGTCGTAATTAGTTTGTTTTactgctgagctacaaaaaaagcaaactgaaatgtttcaattaaatgttcaaatcaagttgggtttttggccctttataagaaaacttttgggcacccctgctaaaaaataaataaataaaaatccagaaaaaaaaagctaaatatttaaCTCCATAGAGAAGACATTTGTGTTCTTTTTGTTGCTTTTTCATTCAGTAATTTGTTTAGCTTCATAGTGAAGATGAATGTTCAGAAAATTTCacctttcatttatttaaaaaaaaatgttattcataTATTGCTTCTGAAGTAAAAATATGTTAATGTGATTAAAATCAGGGGGAAAAGTTACAGGATGCATTGAAAACTACACAATTATTTAATGCCTTATTTAATGACATCTAAAACCATCGTATATACTGTACCCTTATCCCGCTCTTTAAAGCACTCCACTAAACGCAATTACAACGGTTCATTTTCAGAAGCAGTTCATTTTGTGAGCAATGTTCAGTTAATCTCAGTCTTAGACCCACGCGTTACTATTTTTAACACGTTTAGCCATTTTAATTTTACCATAGTCTTGGTCAAGTAGTTTTTCCACTATTTTAGTAGGCATATAGTTTtactttaagtaaaataaataggtaaataaataaaatatcttctcCTCTGCTGACTCCATGAATGGATTTTAGCACTAGCAGTGATGTTACATCTTGACTAGCCAACATTGCCGCCTTTTGTCACCGACAGGCTTGCTATTACGGCTACTGTTTGGCGATATTATCTCTTCAGTCATAAAATAAaggtattaaattaatatttttcaccATATGCCTATGCGAAATTAACACTATATTAAAGACATTGAAAAATAGCACGCTTTTCCAAACTCATCCagattatttttcttttgaagCCACTGAGGTAAGTTCTGTGACCCAGACCACGTACTTTGTCAGAGGTTAAAGTTCACTATCGTCCATTattaaatgagacatttgtcatatTCATTCACAGCAGAGGGCAGCAAATCAACATGTATGTGTGAGCCCACCGATCAAGTTTCTCTCACCCGAAGAAATTCAGACAGGTttgccaacatttttttttttcttcactgccTCCGTTTCAAAGAAGTATGTGAAGTATGGGACTGGCTATATTTTCCGGCCGAGCGTAGCTCGTAACTTTAGATGGACCCGCAAATGACGGGTTTGTCTCAACATTGTGTTGTTGCTGTGGGGATCGCTCCAATTGTAGGTCCCGGGAAAAATAAGGGGGGGCTAAATTTAGGCCGATGTCAGGAGCGAGTGAGTTATAGCATGAAGGCGAAGCCAATGTGAGGAATTAATTCTCAAAGGATGTGAGCTCTGGAAGGTGAGCGATTGGCAAAGATGTGATGGAAACAAGAAGACAGAGGCTCTTTCATAGTAAGGTCGTGTCACTCAGACGCTCCTGGAATAGCTGGGGTGTGCGGGTTGGGGAAACACACCATAAAGACTTGACATGTTGATTTATAGCCTGTTATCTGTTCAAAGTCGTTCTGGAGCTCCTCTGCTAATGTCCAGTTGTCAATTTGACCCACAAGATTTACCCCACAGGTCAAAGATTATATAGCCCAATTACAGTTTCTCTTTATTGATTTTTAAGGAGCTTGTGTCTGTTTCTGGTGTATGTTATATTACATTCTTTGTTGATGcttataaataacaaaatagaaaacattttacaCTGCATGTTCTTACTGTGGtaacacggtggctcaggggttagtactgtcgtctcacagcaagaaggtcgctggttcgagtgacGGCTGGGTTAGTTAGCATTACTGTAgcgtttacatgttctccccatgttggcgtgggtttctgcCGAGTGCTCCATTTTAccccagtccaaagacttgcacaataggtgaattgaataaactaaattgtctgtagtgtaagagtgtgtatggatttttccccgtactgggttgcagctggaagggatccgctgtgtaaaacattagcTGGTTAAGTTGataattcattccgctgtggcaacccctgatgaatacatggattaccctgctaaaaaatccagcttaaaccagcctaggct
>TCONS_00020055
CTTCAGAGCGGCAGAGGGAGCACACAGAGTCCGcatccgctgtgtgtgtgtgtgtcagaaactTTATACAGTCTCACCGCTCCACGAGGCCAGGACAAATATACAGTTTTCTGACTGGACTTTAAACAAGGGCTCTACATGCATCCATCGTATCCATAATATTTTCCCGCAAGACCCTTCGGCTCGGCTGAGTGTTTTGGGGATTTTTATACGCTCAGGAGAAATTGGGATCGGTTTCTCGTGCCTGTGGAAATCCGGTGTTATCGAAGAAAGTTTCTCCCTGTCTCACGGaaggaatgaatacattttagaaaGAAATATCCGCATGATTTAAAGGGATAAAAACATGGAATTCAACCATATCGACACACAATCTGGATTAAATCAGATGACACCCTCAGAAACACATCCCCCAGCTGTTTCAGAGACCAATCAGAGCGATCCCTGTTCAGAGGAAGTTATCCCTTCTTCAAGAACAGAATTGGGCCTTGATGCTGGCACACCTACAAAGATGGATGCCGCACAGAAGCCATCTACTCCAACGCAACCAGACGTCATTCCAAAGTCCCCCGCGAGGTCAAGCGGTAGCCTTCACCCCAAGAAAGatgGAATGAAGTATGATGAACGGCAGAAACAGGCTAAGGAGAGGAGAGAGGAAAAAGCCAAATATCTCGAACAGCGTAGCCAGACTCAAGCTGCTAAAAAGTCCCAGTGGCTGGAGAAGGAGGAACGGGCACGGCAGGTCCGGGAACAGCAGCTGGAGGAGCGAAGGAGGAAGCTGGAGGAGCAGCGGCTGAAGGCAGAGAGACGCCGGGCAGAGCTGGAGGACAGACAGAAACAGAAACTGGAGAAGAACAAGGAGCGATATGAGGCGGCCATCCAGAGGTCTGGTAAGAAGACGTGGGCAGAGATCCGGCAGCAGAGATGGTCCTGGGCCGGAGGCTTAAGCGGCAACTCCAGCCAGAGTCAGAGCAGATGCTCAATATCAGCGGTCAACCTGCCCAAACATGTGGACTCAGTCATAAACAAGAGGCTCTCCAAATCCTCTGCCACTCTCTGGAACACCCCTAGCAGAACTCGCAGCTTGCAGTTAAGTCCATGGGAGAGCAGCATTGTGGACAGACTGATGACACCCACTCTCTCCTTCTTGGCTCGCAGTCGCAGTGCCGCCAGTGTGCTGAACAACTCCAGAGATGCCCAGTCTCCATTGTGCCCACGCTCAGCGTCTGCCAGTCCTCTGTCAGTATGTGCTCATCGGCCTCACCGCTGCTCTGAGCGCTGGAGGGTCACCACCAGCACACCTGATATCACCCAGCGCAGGCGAGACTCCACACCTTTGAGGAAGGATAAGAAGGACAaggagagagaaaatgaaaaggaGAAGAATAGCATCACCAAAGAGAAGGTGCTGAAGAAGAGACAGTCCATGCCTTCAATCAAAACCAGAATAGAGTCCAGTCCGAGTCCAGTGTTTAAACTGAGATCTGCATCTCCTGCTACGCCCAAGGCTCGTGTGTCGTCCCCAAGTCCTGCAGTGTCTCCTAAACCTCCAGCAGCACAAGCAAGCCCCATGACTCCTAAAGCCCGCCCCAAAAGAGCCAGGACCCCTGCCCGTGTGGAGACCCGCACCGCCTCTCCTGTTGCCATCGATAGGGTTCGAGAGCCCCGTAGGCCGGCTACACCCGAACAACCAAAGACCTCGTCTCCTGTCCCCTCTATTGTGGTGTCATCAGTCCTGGACACGCCCCCTGTCACCAGTGCTCCAATGGTGTCGGTTTCTGCGTCCCCTGTGCCCGAGGACTCTCCTCTTGTCTCCGCCCTCCCGCAGGTGTCCTCTCCAGCGCCCTCTCCTGGCAAACCCATGGCTGGCACAAACAACCCAGAGGAGGCCACCCGCATCTTGGCTGAGAAGAGACGACAGGCTCGCGAACAGAgagagaaggaggaggaagaacGGAGAGAACAGCTGGAGAGAGAGAGAATTCAGCGTGAGGAAAGGCTGGTGCAGGAGGCCGAGGAGAGGAAGCGCAGGGAGGAAGAGGCTCGGCTGATGGCGGAGCAGGAGAAGTTAAGAGAGGAAGCCCGGCGCCTACAGGAGGAGGAGGCAGCACTGGAAAGAGCCAAAATTGAACAAGAAGAGAACGAACGCCTTCAGAAACAGAAAGAGGAGGCTGAAACAAAGGCCAAAGAGGAAGCCGAGAAGCAGCGCCTGGAGCGAGAGAAACACTTCCAAAAGGAGGAGCAGGAGAGGCTGGAGAGAAAGAAGCGTCTGGAGGAGATTATGAAAAGAACACGAAAAACAGATGCCGCAGAGAAGAAAGACTCGACAAGTCCAGCTCAAGTCAATGGGAAAGATTCAGAGAtgaataaagCTGCCGACTACCAGCCAAACACAGCACTGAAACAAGATGGTGTGAACGAAAGtctgTCTGTTCCTGTGTTGAACGGCATTCAGACTTCCAAACACGAGAATGGCCTGTCAGCAAAAGGAGAGGCATCTCAGTTCGAAGAGATCCTTCAGCTGTCCAATCACAACAACGGGCGGGAGAAATCGGAGTCTGACAGACCCGATGAGCCAATCATGGCCTTCGAAAGCAGCGAATCATTCCTAAAAAAAACAGGCCCCCTTAAGCCTCAGCATGTGGCAGAGGTCCTCTGAGGTCTTAAACTTTAGGATAAAGCCTTAAACCTGCAAGTCCCTCACCCCCGTCTGCCTGAGGGACCCGATGGAAAGAAGCACAGCATGAAGGAGACCTGTGCCAAACCCAAAAACTGTCTTCTGTTTAGACTGTACAGAGCAACCCTTGCTCACGGTGCATGATGGAAAATACACAACAATCAAGCCGAGCTGAACTGCACCAGAATCACTATCCATCAGAcccgatcacacacacacacttcaccacGATACAACATCATGTTtagtttttctaaaaaaaaaagagagaaagcttCTGATAAACTTTAATCCTTGTCGTTATTCATGCTTTTGTGGGCAGATTGGAGAAGTGCTTtgggtgttttatttttcagtgtttagTTATTTAACTGGAAGAGAATTGTAACTACTGGGTACAGTTGTATGTGAATAATGTAAATTGGACAATGGGAGGAGAGGATCTGTGAATAAAACAGAATGAAAGGGGCTGGCGTTTTGTGA
>TCONS_00020057
GAGCGATATGAGGCGGCCATCCAGAGGTCTGGTAAGAAGACGTGGGCAGAGATCCGGCAGCAGAGATGGTCCTGGGCCGGAGGCTTAAGCGGCAACTCCAGCCAGAGTCAGAGCAGATGCTCAATATCAGCGGTCAACCTGCCCAAACATGTGGACTCAGTCATAAACAAGAGGCTCTCCAAATCCTCTGCCACTCTCTGGAACACCCCTAGCAGAACTCGCAGCTTGCAGTTAAGTCCATGGGAGAGCAGCATTGTGGACAGACTGATGACACCCACTCTCTCCTTCTTGGCTCGCAGTCGCAGTGCCGCCAGTGTGCTGAACAACTCCAGAGATGCCCCGTCTGCCAGTCCTCTGTCAGTATGTGCTCATCGGCCTCACCGCTGCTCTGAGCGCTGGAGGGTCACCACCAGCACACCTGATATCACCCAGCGCAGGCGAGACTCCACACCTTTGAGGAAGGATAAGAAGGACAaggagagagaaaatgaaaaggaGAAGAATAGCATCACCAAAGAGAAGGTGCTGAAGAAGAGACAGTCCATGCCTTCAATCAAAACCAGAATAGAGTCCAGTCCGAGTCCAGTGTTTAAACTGAGATCTGCATCTCCTGCTACGCCCAAGGCTCGTGTGTCGTCCCCAAGTCCTGCAGTGTCTCCTAAACCTCCAGCAGCACAAGCAAGCCCC

Function

symbol description
map7d1a Predicted to be involved in microtubule cytoskeleton organization. Predicted to be active in microtubule cytoskeleton. Is expressed in ciliary marginal zone. Orthologous to human MAP7D1 (MAP7 domain containing 1).

GO:

id name namespace
GO:0000226 microtubule cytoskeleton organization biological_process
GO:0015630 microtubule cytoskeleton cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-22 Predicted to be involved in microtubule cytoskeleton organization. Predicted to be active in microtubule cytoskeleton. Is expressed in ciliary marginal zone. Orthologous to human MAP7D1 (MAP7 domain containing 1).

Ensembl:

ensembl_id ENSDARG00000098802

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020054 False 6453 mRNA 0.44 19 35661331 35776074
TCONS_00020055 False 3160 mRNA 0.51 19 35661771 35773224
TCONS_00020057 True 687 mRNA 0.55 6 35728992 35750645

Neighbor

gene id symbol gene type direction distance location
XLOC_010094 si:ch211-1i11.3 coding upstream 16564 35593785 ~ 35644767 (+)
XLOC_010093 NA coding upstream 104355 35555766 ~ 35556976 (+)
XLOC_010092 cited4b coding upstream 123840 35535171 ~ 35537491 (+)
XLOC_010091 rab42b coding upstream 255444 35401543 ~ 35405887 (+)
XLOC_010090 si:dkey-34d22.5 coding upstream 262819 35395597 ~ 35398512 (+)
XLOC_010097 NA coding downstream 1601 35777675 ~ 35780839 (+)
XLOC_010098 NA coding downstream 39315 35815389 ~ 35817061 (+)
XLOC_010099 thrap3a coding downstream 94382 35870456 ~ 35901707 (+)
XLOC_010100 sh3d21 coding downstream 128957 35905031 ~ 35938157 (+)
XLOC_010101 NA coding downstream 257344 36033418 ~ 36038394 (+)
XLOC_010087 CR385021.1 non-coding upstream 380543 35206855 ~ 35280788 (+)
XLOC_010086 NA non-coding upstream 745078 34913284 ~ 34916253 (+)
XLOC_010085 AL929184.1 non-coding upstream 936649 34724568 ~ 34724682 (+)
XLOC_010082 NA non-coding upstream 1159128 34478997 ~ 34502203 (+)
XLOC_010103 NA non-coding downstream 435706 36211780 ~ 36218004 (+)
XLOC_010104 NA non-coding downstream 462397 36238471 ~ 36339909 (+)

Expression


Co-expression Network