XLOC_010098



Basic Information


Item Value
gene id XLOC_010098
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 35815389 ~ 35817061 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021730
tctgctattggtcaaactgcatcagcggtgagttctcagatgagttcaactgtcaacattaaatattacgttaatgctgcataatgtatttttattggagattagttggtgtttataaatatgttatcatttactttatatttaatgagtgaaaatatattcggttgtccagtttagggtaactatgtctaataaaactttgattcattcatattatttattattttattactttaaaaaatattacatttcaagtactaagtttaaaaatgttttcggctgatctttttcattttaaattatttattgaagttggggtcattgtatgtggcgatctattttttacagtctatgctcgctatcccaaggttcattgcgatcccaaggttcactgcggttttccacaagatgcagaaacttttgacatatgaattcatcttgactaaggaactcttcacagcactgcatctgaacagtcacaacctcacagcgctgcacaactgccccactcatgatcagtgttgaagctggaacctcatcttgtgtacagcaaaggcagagctgaaaattcactgtttgtcttgtattgtgtggtaagtcatagttttattaatttttaaattttattgcaacactaagtagtccattctgtggccaatatgatataaagggcctaaaatgggactgacgtgatcattgttttgatttctagataagtactcatggg

Function


GO:

id name namespace
GO:1990402 embryonic liver development biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021730 True 727 lncRNA 0.34 3 35815389 35817061

Neighbor


gene id symbol gene type direction distance location
XLOC_010097 NA coding upstream 34550 35777675 ~ 35780839 (+)
XLOC_010095 map7d1a coding upstream 39315 35661331 ~ 35776074 (+)
XLOC_010096 AL773558.2 coding upstream 89257 35726018 ~ 35726132 (+)
XLOC_010094 si:ch211-1i11.3 coding upstream 170622 35593785 ~ 35644767 (+)
XLOC_010093 NA coding upstream 258413 35555766 ~ 35556976 (+)
XLOC_010099 thrap3a coding downstream 53395 35870456 ~ 35901707 (+)
XLOC_010100 sh3d21 coding downstream 87970 35905031 ~ 35938157 (+)
XLOC_010101 NA coding downstream 216357 36033418 ~ 36038394 (+)
XLOC_010102 sh3bp5b coding downstream 309249 36126310 ~ 36163508 (+)
XLOC_010103 NA coding downstream 394719 36211780 ~ 36218004 (+)
XLOC_010087 CR385021.1 non-coding upstream 534601 35206855 ~ 35280788 (+)
XLOC_010086 NA non-coding upstream 899136 34913284 ~ 34916253 (+)
XLOC_010104 NA non-coding downstream 421410 36238471 ~ 36339909 (+)
XLOC_010105 NA non-coding downstream 465199 36282260 ~ 36357102 (+)
XLOC_010106 NA non-coding downstream 528922 36345983 ~ 36348575 (+)

Expression



Co-expression Network