XLOC_000101 (si:ch211-160d14.15)


Basic Information

Item Value
gene id XLOC_000101
gene name si:ch211-160d14.15
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 8593560 ~ 8597015 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000193
CTCTTTTTCTGTTTTAGGAATATTTGACGATGGCATCTAATGCAAGAGGCAACAGACCCACCGTGTTCGTGGTCGGTGACAGCTACATTCGCCGTGGGGAACAGTGGGCAAGGCAGACTGTCGGGACCAACCTTGGTCTCGACGCCCATATCAGGTGGTTTGGCTGTGGAGGCTTGGTCTGGAGAAAccttctctctttctttcaccGCTGTCTTGGAGGAAGAGCTGTGCCAGATGTCCTGCTTGTTCACTGTGGTGGAAATGATCTTGGTAAGATCAAGAGTATTATACTTGCCGCAATGATCAAGCAGGACTTGCGAGACCTCCATAGACAGTTCCCTCAGATGAAGATTATCTTCTCTGCCATCACCCAGCGATGCCTGTGGAGGTCTGCTGAGAATCTGAAGAAGGTTGACAGGGCACGGCGCTTTGTCAACCGTGTGATGGCTACTTTTATGGTGTCAGTTGGTGGTGCCATTGTTCATCACCCTGAGATAAAACATAAAGATCCTAGCCATTTTTTACGTGATGGAGTTCATTTGACCCCTTTGGGCaatgacatatttttaaacaacCTTGCCCGGTGTCTGAAAGATCAAATCCAGTAGGGTGATGCTGGATTTGAAGTTTCCACCAAATTTAGGGATGAAAAATGGCTAcgatgttttagtttttttgataTGTGATGaacaatgtgtgtgttttttttttgttgtttatttgatgttgttttaccTAGCCATCACACTTCAGACAGATCTGTCACAGCTTTTTCTCCCTCTTCTACCTTTTCCCCTCTTCTCCTCTTTTCCAGACCCTATGCTTCCTCAGCCAATCCACCTGATAAACTTCTACAGCACTTTACAATACGGGGcacataattaatattattctatttacaaacatgaactaatatatgtattattaattgatagtttgttcatgctagtaaaaaCACTATAACTATGTGTCCCGTATTTAAAAAGTGTTGCATTTATTTTTCCCCACGGTGAATGTagctgtcatgatcaccagctgGGGCATGCACAACCTCTACTAGATGACACTCTATTCCACATCTGGATTACATTTCCCATAAAGCTTTGCACCTCCACAGATGATACATTTTACCAGGAGGATTTCCTTGATTGCTGTTTCACTTTTTTTCTGTCATCTGGACTACTTAAGACTTACACATCAGAAACTGGAATGGATAGTCCAATTTGTTGGAATCATTCCTTTCGGCCAGGATGAACTGATTCAGGTTTCAGGATTTATATATTGATGATAGTTTGGCATCCTTTCACCAGCTTTAGCCGAGACACCACTTACCAGCTTCAAACTTTTTCATTGTCTACATACAAGACATttttgagaaaacattttacactgTGTGCAGAAACCTGCACATGCTGAATTGGACAGGGTGGCAGATATTACGCCATTTGAGAAGGGATCCGTGTCTTCTTGAGAATATAATAATTTTCTGTATGCAACATTTGGAAGATATGAAGTTCCTAcatgatcatgttttttttttttttcattcattttcgtttttacttagtccctttattaatctggggtcaccacagtggaatgaatcgccaaataatccagcatttgttttacctttttgccacaacccatcactgagtAACACCCatgcattctcattcacacacatacattacggatatattagcttacccaattcacctctaccctcttagaacttgtgggggaaaccagagcacctggaggaagaaCGCCAACACGTACTGTATAAAGGTTTTCTTGTTTTATGTTATCAGGTTTTTGATTTTCATTGTTTCATGattcttaattgtttaatgtctGTCTGGATTTTGTATTACTTTGTGGATTACCTGACAGTGCTGTTTGCTCCTCATTTTGACCCTGCCTGATAGAGCTGCACAATGCATCGTTCTAGTGTCATTATAGCAATGTGATCAtttacaatagtcacatcacaggatatgcaatgttgagtttgttttataatgtatcatttgcatgtgtttttgaggcttgtaactatataataattttaaaaggatTCAGGAATAAGAGTGtaccatttttaaattttaatgcaattaattttacttaattatttttattattacctgAATTACCTGAGATTCAGAAAACACTGttcattttaattgtatatttgtcATGCATTTATCAATGTTTGTAGATTGTTTCTTAGATTTTACACATGTATTCCCACTACAGAATCATCTCAAtcaatctaaacttgttttttttttttattcaaatataaatattcaagTTATGTGGTGAAATTTTATTCACATTGCAATATACAATTGTAGGAATAACAAAATATGTTAGATTTTTgacatcatgcagccctactgctTGCTTTGACACTACTTGGTTCATAAACTGCATTTTTGAATTCTCACTTATGTCATCCCTAAGTTATCATGATTTTGTTTTGGTGttgattttgtaaaaaataaaaattttatcctG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100771

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000193 True 2526 mRNA 0.38 2 8593560 8597015

Neighbor

gene id symbol gene type direction distance location
XLOC_000100 NA coding upstream 2924 8587230 ~ 8590636 (+)
XLOC_000099 AL928650.4 coding upstream 7494 8579197 ~ 8586066 (+)
XLOC_000098 AL928650.2 coding upstream 16286 8575307 ~ 8577274 (+)
XLOC_000097 NA coding upstream 18503 8573777 ~ 8575057 (+)
XLOC_000096 smcr8b coding upstream 53510 8534698 ~ 8540050 (+)
XLOC_000102 SLC29A4 coding downstream 4920 8601935 ~ 8610564 (+)
XLOC_000103 fscn1b coding downstream 65515 8662530 ~ 8670486 (+)
XLOC_000104 NA coding downstream 97181 8694196 ~ 8702684 (+)
XLOC_000105 NA coding downstream 353859 8950874 ~ 8965939 (+)
XLOC_000106 NA coding downstream 370464 8967479 ~ 8976422 (+)
XLOC_000087 NA non-coding upstream 919331 7672121 ~ 7674229 (+)
XLOC_000084 NA non-coding upstream 1080798 7512529 ~ 7512762 (+)
XLOC_000111 NA non-coding downstream 532371 9129386 ~ 9132490 (+)
XLOC_000116 BX323038.1 non-coding downstream 680831 9277846 ~ 9285351 (+)
XLOC_000120 NA non-coding downstream 1289940 9886955 ~ 9914630 (+)

Expression


Co-expression Network