G246669



Basic Information


Item Value
gene id G246669
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 4749815 ~ 4750141 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU279945
CGGATCCTTCTTTTACGCAGCCATGATGTTGTAATTGATGCAGTATGTGGTCTGGCATTGTCATGTTGGAAAATGCAAGGTCTTCCCGGAAAGAGACGACGTCTGGATGGAAGCATATGTTGTTCTAGAACTTGGATATACCTTTCAGCATTGATGGTGCCTTTCCAGATGTGTAAGCTACCCATGCCACACGCACTCATGCAACCCCATACCATCAGAGATGCAGGCTTCTGAACTGAGCGCTGATAACAACTTGGGTTGTCCTTGTCCTCTTTAGTCCGAATGACATGGCGTCCCAGTTTTCCAAAAAGAGCTTCAAATTTTGAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU279945 True 327 lncRNA 0.46 1 4749815 4750141

Neighbor


gene id symbol gene type direction distance location
CI01000057_04743808_04746558 NA coding downstream 1718 4743406 ~ 4748097 (-)
CI01000057_04728914_04731946 NA coding downstream 16092 4728872 ~ 4733723 (-)
CI01000057_04718947_04721031 NA coding downstream 28739 4718918 ~ 4721076 (-)
CI01000057_04657451_04663499 NRAMP-BETA, SLC11A2, NRAMP-ALPHA coding downstream 86316 4657262 ~ 4663499 (-)
CI01000057_04647822_04649004 NPFFL coding downstream 100811 4647773 ~ 4649004 (-)
CI01000057_04787300_04788191 NA coding upstream 36571 4786712 ~ 4788191 (-)
CI01000057_04794580_04834143 COL2A1 coding upstream 43376 4793517 ~ 4834429 (-)
CI01000057_04861618_04865902 ITGA7 coding upstream 111477 4861618 ~ 4865902 (-)
CI01000057_04866089_04878847 ITGA7 coding upstream 115948 4866089 ~ 4878847 (-)
CI01000057_04891502_04906844 ELMO2 coding upstream 140094 4890235 ~ 4906844 (-)
G246662 NA non-coding downstream 24637 4724516 ~ 4725178 (-)
G246658 NA non-coding downstream 35456 4714091 ~ 4714359 (-)
G246600 NA non-coding downstream 94376 4654977 ~ 4655439 (-)
G246632 NA non-coding downstream 151521 4597952 ~ 4598294 (-)
G246587 NA non-coding downstream 190378 4557111 ~ 4559437 (-)
G246676 NA non-coding upstream 30625 4780766 ~ 4781052 (-)
G246691 NA non-coding upstream 51531 4801672 ~ 4804379 (-)
G246703 NA non-coding upstream 112663 4862804 ~ 4863182 (-)
CI01000057_04916382_04926437 ARFGAP1 non-coding upstream 163047 4916287 ~ 4926437 (-)
G246682 NA non-coding upstream 186810 4936951 ~ 4937172 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other downstream 852124 3887203 ~ 3892054 (-)
CI01000057_01904867_01921400 NA other downstream 2828394 1904533 ~ 1921905 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other downstream 2944662 1801528 ~ 1806454 (-)
G244358 NA other downstream 4178787 570530 ~ 571028 (-)
CI01000057_04927533_04931127 CDK4 other upstream 178603 4927533 ~ 4931420 (-)
G246780 NA other upstream 460969 5086312 ~ 5283617 (-)
CI01000057_05925181_05926068 NA other upstream 1173399 5923540 ~ 5927295 (-)

Expression



Co-expression Network