Gene
RNA
| Item | Value |
|---|---|
| gene id | G246763 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 4963341 ~ 4963540 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| ATP synthase subunit e, mitochondrial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU280051 | True | 200 | lncRNA | 0.45 | 1 | 4963341 | 4963540 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_04927533_04931127 | CDK4 | coding | downstream | 32214 | 4927533 ~ 4931420 (-) |
| CI01000057_04916382_04926437 | ARFGAP1 | coding | downstream | 36904 | 4916287 ~ 4926437 (-) |
| CI01000057_04891502_04906844 | ELMO2 | coding | downstream | 56497 | 4890235 ~ 4906844 (-) |
| CI01000057_04866089_04878847 | ITGA7 | coding | downstream | 84494 | 4866089 ~ 4878847 (-) |
| CI01000057_04861618_04865902 | ITGA7 | coding | downstream | 97439 | 4861618 ~ 4865902 (-) |
| CI01000057_05163258_05169859 | NA | coding | upstream | 199100 | 5162640 ~ 5170119 (-) |
| CI01000057_05442832_05459768 | VGLL4 | coding | upstream | 479244 | 5442784 ~ 5459768 (-) |
| CI01000057_05464070_05466835 | NA | coding | upstream | 500500 | 5464040 ~ 5469344 (-) |
| CI01000057_05486207_05495209 | TAMM41 | coding | upstream | 522500 | 5486040 ~ 5495657 (-) |
| CI01000057_05553430_05562372 | NA | coding | upstream | 588018 | 5551558 ~ 5562448 (-) |
| G246753 | NA | non-coding | downstream | 11005 | 4949553 ~ 4952336 (-) |
| G246751 | NA | non-coding | downstream | 16719 | 4946387 ~ 4946622 (-) |
| G246750 | NA | non-coding | downstream | 17589 | 4945398 ~ 4945752 (-) |
| G246682 | NA | non-coding | downstream | 26169 | 4936951 ~ 4937172 (-) |
| G246764 | NA | non-coding | upstream | 5493 | 4969033 ~ 4969962 (-) |
| G246793 | NA | non-coding | upstream | 99848 | 5063388 ~ 5093263 (-) |
| G246782 | NA | non-coding | upstream | 117729 | 5081269 ~ 5083402 (-) |
| G246780 | NA | non-coding | upstream | 122772 | 5086312 ~ 5283617 (-) |
| G246847 | NA | non-coding | upstream | 298352 | 5261892 ~ 5271353 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | downstream | 1065650 | 3887203 ~ 3892054 (-) |
| CI01000057_01904867_01921400 | NA | other | downstream | 3041920 | 1904533 ~ 1921905 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | downstream | 3158188 | 1801528 ~ 1806454 (-) |
| G244358 | NA | other | downstream | 4392313 | 570530 ~ 571028 (-) |
| CI01000057_05925181_05926068 | NA | other | upstream | 960000 | 5923540 ~ 5927295 (-) |
