Gene
RNA
| Item | Value |
|---|---|
| gene id | G246793 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 5063388 ~ 5093263 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU280100 | False | 266 | lncRNA | 0.44 | 2 | 5063388 | 5090747 |
| TU280099 | True | 684 | lncRNA | 0.41 | 2 | 5090297 | 5093263 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_04927533_04931127 | CDK4 | coding | downstream | 132261 | 4927533 ~ 4931420 (-) |
| CI01000057_04916382_04926437 | ARFGAP1 | coding | downstream | 136951 | 4916287 ~ 4926437 (-) |
| CI01000057_04891502_04906844 | ELMO2 | coding | downstream | 156544 | 4890235 ~ 4906844 (-) |
| CI01000057_04866089_04878847 | ITGA7 | coding | downstream | 184541 | 4866089 ~ 4878847 (-) |
| CI01000057_04861618_04865902 | ITGA7 | coding | downstream | 197486 | 4861618 ~ 4865902 (-) |
| CI01000057_05163258_05169859 | NA | coding | upstream | 69377 | 5162640 ~ 5170119 (-) |
| CI01000057_05442832_05459768 | VGLL4 | coding | upstream | 349521 | 5442784 ~ 5459768 (-) |
| CI01000057_05464070_05466835 | NA | coding | upstream | 370777 | 5464040 ~ 5469344 (-) |
| CI01000057_05486207_05495209 | TAMM41 | coding | upstream | 392777 | 5486040 ~ 5495657 (-) |
| CI01000057_05553430_05562372 | NA | coding | upstream | 458295 | 5551558 ~ 5562448 (-) |
| G246764 | NA | non-coding | downstream | 93426 | 4969033 ~ 4969962 (-) |
| G246763 | NA | non-coding | downstream | 99848 | 4963341 ~ 4963540 (-) |
| G246753 | NA | non-coding | downstream | 111052 | 4949553 ~ 4952336 (-) |
| G246751 | NA | non-coding | downstream | 116766 | 4946387 ~ 4946622 (-) |
| G246750 | NA | non-coding | downstream | 117636 | 4945398 ~ 4945752 (-) |
| G246847 | NA | non-coding | upstream | 168629 | 5261892 ~ 5271353 (-) |
| G246857 | NA | non-coding | upstream | 204569 | 5297832 ~ 5298088 (-) |
| G246946 | NA | non-coding | upstream | 471259 | 5564522 ~ 5567290 (-) |
| G246950 | NA | non-coding | upstream | 475075 | 5568338 ~ 5888474 (-) |
| G246981 | NA | non-coding | upstream | 626528 | 5719791 ~ 5720606 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | downstream | 1165697 | 3887203 ~ 3892054 (-) |
| CI01000057_01904867_01921400 | NA | other | downstream | 3141967 | 1904533 ~ 1921905 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | downstream | 3258235 | 1801528 ~ 1806454 (-) |
| G244358 | NA | other | downstream | 4492360 | 570530 ~ 571028 (-) |
| G246780 | NA | other | upstream | 117847 | 5086312 ~ 5283617 (-) |
| CI01000057_05925181_05926068 | NA | other | upstream | 830277 | 5923540 ~ 5927295 (-) |
