Gene
RNA
| Item | Value |
|---|---|
| gene id | G246946 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 5564522 ~ 5567290 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU280262 | False | 247 | lncRNA | 0.47 | 2 | 5564522 | 5564974 |
| TU280263 | True | 502 | lncRNA | 0.46 | 4 | 5564522 | 5567290 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_05553430_05562372 | NA | coding | downstream | 2074 | 5551558 ~ 5562448 (-) |
| CI01000057_05486207_05495209 | TAMM41 | coding | downstream | 68865 | 5486040 ~ 5495657 (-) |
| CI01000057_05464070_05466835 | NA | coding | downstream | 95178 | 5464040 ~ 5469344 (-) |
| CI01000057_05442832_05459768 | VGLL4 | coding | downstream | 104754 | 5442784 ~ 5459768 (-) |
| CI01000057_05163258_05169859 | NA | coding | downstream | 394403 | 5162640 ~ 5170119 (-) |
| CI01000057_05633248_05635383 | MKRN2OS.2 | coding | upstream | 65925 | 5633215 ~ 5635898 (-) |
| CI01000057_05827116_05827514 | NA | coding | upstream | 259803 | 5827093 ~ 5827837 (-) |
| CI01000057_05830634_05838724 | MYBL2, MYBL2B | coding | upstream | 262768 | 5830058 ~ 5839047 (-) |
| CI01000057_05842522_05847302 | IFT52 | coding | upstream | 275029 | 5842319 ~ 5847302 (-) |
| CI01000057_05849700_05856513 | SRSF6 | coding | upstream | 281816 | 5849106 ~ 5856513 (-) |
| G246857 | NA | non-coding | downstream | 266434 | 5297832 ~ 5298088 (-) |
| G246780 | NA | non-coding | downstream | 280905 | 5086312 ~ 5283617 (-) |
| G246847 | NA | non-coding | downstream | 293169 | 5261892 ~ 5271353 (-) |
| G246793 | NA | non-coding | downstream | 471259 | 5063388 ~ 5093263 (-) |
| G246782 | NA | non-coding | downstream | 481120 | 5081269 ~ 5083402 (-) |
| G246950 | NA | non-coding | upstream | 1048 | 5568338 ~ 5888474 (-) |
| G246981 | NA | non-coding | upstream | 152501 | 5719791 ~ 5720606 (-) |
| G247041 | NA | non-coding | upstream | 295495 | 5862785 ~ 5886376 (-) |
| G247058 | NA | non-coding | upstream | 320170 | 5887460 ~ 5890066 (-) |
| CI01000057_04927533_04931127 | CDK4 | other | downstream | 633102 | 4927533 ~ 4931420 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | downstream | 1666831 | 3887203 ~ 3892054 (-) |
| CI01000057_01904867_01921400 | NA | other | downstream | 3643101 | 1904533 ~ 1921905 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | downstream | 3759369 | 1801528 ~ 1806454 (-) |
| CI01000057_05925181_05926068 | NA | other | upstream | 356250 | 5923540 ~ 5927295 (-) |
