Gene
RNA
| Item | Value |
|---|---|
| gene id | G247058 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 5887460 ~ 5890066 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU280407 | True | 424 | lncRNA | 0.60 | 3 | 5887460 | 5890066 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_05857113_05861024 | ACOT8 | coding | downstream | 24981 | 5856980 ~ 5862479 (-) |
| CI01000057_05849700_05856513 | SRSF6 | coding | downstream | 30947 | 5849106 ~ 5856513 (-) |
| CI01000057_05842522_05847302 | IFT52 | coding | downstream | 40158 | 5842319 ~ 5847302 (-) |
| CI01000057_05830634_05838724 | MYBL2, MYBL2B | coding | downstream | 48413 | 5830058 ~ 5839047 (-) |
| CI01000057_05827116_05827514 | NA | coding | downstream | 59946 | 5827093 ~ 5827837 (-) |
| CI01000057_05925181_05926068 | NA | coding | upstream | 35005 | 5923540 ~ 5927295 (-) |
| CI01000057_05955545_05960873 | EDN3 | coding | upstream | 65472 | 5955538 ~ 5961098 (-) |
| CI01000057_05989326_06003691 | NA | coding | upstream | 98703 | 5988769 ~ 6004299 (-) |
| G247041 | NA | non-coding | downstream | 1084 | 5862785 ~ 5886376 (-) |
| G246981 | NA | non-coding | downstream | 166854 | 5719791 ~ 5720606 (-) |
| G246946 | NA | non-coding | downstream | 320170 | 5564522 ~ 5567290 (-) |
| G246857 | NA | non-coding | downstream | 589372 | 5297832 ~ 5298088 (-) |
| G247059 | NA | non-coding | upstream | 4199 | 5894265 ~ 5894570 (-) |
| G247060 | NA | non-coding | upstream | 5068 | 5895134 ~ 5895348 (-) |
| G247061 | NA | non-coding | upstream | 8276 | 5898342 ~ 5898933 (-) |
| G247062 | NA | non-coding | upstream | 10585 | 5900651 ~ 5901238 (-) |
| G247063 | NA | non-coding | upstream | 12251 | 5902317 ~ 5902549 (-) |
| G246780 | NA | other | downstream | 603843 | 5086312 ~ 5283617 (-) |
| CI01000057_04927533_04931127 | CDK4 | other | downstream | 956040 | 4927533 ~ 4931420 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | downstream | 1989769 | 3887203 ~ 3892054 (-) |
| CI01000057_01904867_01921400 | NA | other | downstream | 3966039 | 1904533 ~ 1921905 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | downstream | 4082307 | 1801528 ~ 1806454 (-) |
