XLOC_010110


Basic Information

Item Value
gene id XLOC_010110
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 36606042 ~ 36608974 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021992
TTTTCTGCTGGTAAAATGTGGCCAGGGTCAATTCTGACCCATAAGTCAACAGGAGGGATGAACAGTGTCAGTCCCAGTCATCTTCTTACCTTCagGTATGCTGGAACATTGTTTTTCTATTTCCCGCATGATGTCAAACAGCTGCTTCACTGTGTTTTTAACCGCCTTCTTTGGAGATATCCTTGTGTCTGGTGGGTATTTCTTTGGATCTGTCAGAAAGAGAGGTTTAGTGTTGAGGAAGCAGTTCAGGTAAAGCCCCATTCAACTGAGTCTCAGAGACTAATTGAATGTTTTCGACTTCCTCCTGAAATAATCTGACTTACCATGACAGATGTGCATCCCACAGCCAAAATCAATTAGCTTGATTTGCAGAGGCGGGTCGATGACGAGGATATTACAATCATGAATATCATGATGACAAATTTTCCGCCTCAAGCACTCCTGCGCTGCTTTGACAATCTGCAGGATAAGCGTATGTGCGACTCTCTCCTCCAGGTGTTGGTGCTTCTGCAGGAAATCCTCCAGTGTTCTGCACGGGCCGAGATACTCCATCACCAACATTATTGTCTTACACACTTTCTGTAAGCAGATGCAATGAGTTAAAATAAAGCACACGACAGCAGTCCTCAGGTCAGTCtttactaggcatgggccggtattagATTGtggcggtatgataaccttggatcaaaatttcacggtattgtgattactgctctaatatgTAGTCTTTTTGAATGTCTGGGTAAAAGACAAACTTGTTCCCctctgaaaacaatatattttattttgtaatagatttataatatttttttggcagtaaacatgtcaggctaaataattcaaaagatTAATTGACTTCTGCGGCcctcatttgtttcaaaaacactgatttctttactatttaaaatagcatttttggatatttattctgctggagataccgttgtcctaaaaaaactgtaaataatatatcTCACACaacagtattacagaaaatttggcagttttaaaacctcgacttttccataccttaaaaacagttattggcccatgcctagtctttacactggcttccagttacattcaggatagattttaaagtagaaattagtttattttgcTTACCGCACCGGCATATCATTAACCCACAAgcttttctgaaaacaagacaaagttATTTACATGTccagaaatgcttcttgatttaggaatttgaatttacaaaattaaaacgaCAATAAGAAACGAGACAAACCCTCCTGCAGCGCattgtgcatgaaatgtgctgtataaatacacCTACTCCTCTTGGCAATTTCTCCACTTTAACTAAAAACCATTCCTGGAGCTTGATGAGCAGCGGGCTTGGGGGATCTCTCGCAATTGTCATCATGGCCACTTCGATTGGTATGGGTAACGGATATCCAGGCTGAAGATAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021992 True 1443 lncRNA 0.39 2 36606042 36608974

Neighbor

gene id symbol gene type direction distance location
XLOC_010108 NA coding upstream 14701 36560692 ~ 36591341 (+)
XLOC_010107 NA coding upstream 48162 36548027 ~ 36557880 (+)
XLOC_010105 NA coding upstream 248940 36282260 ~ 36357102 (+)
XLOC_010106 NA coding upstream 257467 36345983 ~ 36348575 (+)
XLOC_010104 NA coding upstream 266133 36238471 ~ 36339909 (+)
XLOC_010111 col6a4a coding downstream 42010 36650984 ~ 36719705 (+)
XLOC_010112 decr1 coding downstream 139564 36748538 ~ 36760156 (+)
XLOC_010113 si:ch73-215d9.1 coding downstream 159700 36768674 ~ 36931828 (+)
XLOC_010114 NA coding downstream 346114 36955088 ~ 36958828 (+)
XLOC_010115 adgrb1a coding downstream 861743 37470717 ~ 37630250 (+)
XLOC_010116 NA non-coding downstream 1024473 37633447 ~ 37641863 (+)
XLOC_010117 NA non-coding downstream 1050546 37659520 ~ 37660611 (+)
XLOC_010118 NA non-coding downstream 1104290 37713264 ~ 37713637 (+)
XLOC_010119 BX294107.1 non-coding downstream 1162509 37771483 ~ 37771600 (+)

Expression


Co-expression Network