CI01000058_00424190_00424456


Basic Information

Item Value
gene id CI01000058_00424190_00424456
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 424142 ~ 424963 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_00424190_00424456.mRNA
AGAACTTTGCAAGCATAGAGGCAGGGAGAGCTAGAGGCAGAGGAAGAAGAAGACAGAGAGAGAGAGGAGGACGTGGTCGAAGAGGCCACGCAAGGACCATTATTTCGGATGACATAAGAGCAACTTTGGTGGACCATGTCATAAACCATGGCCTGACTATGAGGGAATCTGGGCAGAGAGTCCATTCTAATCGAAGCCGTTTCACAGTTTCATCCATAATAAGGACATTCCGACTGGAAAACAGGTATGTCTTCAACTCTCTACTCTACTCAGACTGTATCTAGAGTATTTACAGTACTGTACCATATCATGTTACTGTATCACATGTATTGTATTTCAGGGTGGCTAATGGTCCTTTTCCAACAAATGTGGTAGTTTTGTGAAACATACCGTGATAACGTGTTAAGTTTTCAGTACTGTGTATGGTAAATACAGTAAAGTTCAGTATACACAGTACTGTAAAAAAGAAGCAAACGAAAACAATTTGTGGTTGCATTTTTCTACAGAATGGCTAGAAGACCTACTGGGGGTGGATGCCAATGCCTGTTCACCCAACAGCAGGAACTTGCCATAGTGAACCTAGTCAGAGCAAACGATGCAATCCGTCTCCACCAGCTACAGCAACAAATACTTGCAGATAGCCAAGTTTTCAACAACATAAATCGAGTAAGCATTACAACTATCAGACGCATCTTGGTAAAGCACAACATGACCATGAAGCAATTGTACAGGGTCCCATTTGAGAGGAACAGTGTCAAGGTCAAAGAACTTTGACATGAATATGTACAGGTAAGTGTTTCAGTCCTTTACATTTACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_00424190_00424456.mRNA True 822 mRNA 0.42 1 424142 424963

Neighbor

gene id symbol gene type direction distance location
CI01000058_00282795_00302233 RAP1B, RAP1A coding downstream 121909 281394 ~ 302233 (-)
CI01000058_00252333_00267027 RPN2 coding downstream 157115 252283 ~ 267027 (-)
CI01000058_00155300_00224503 CDK5RAP1 coding downstream 199639 155300 ~ 224503 (-)
CI01000058_00018179_00021093 NA coding downstream 402713 17824 ~ 21429 (-)
CI01000058_00441219_00462553 NA coding upstream 16248 441211 ~ 462719 (-)
CI01000058_00482663_00504956 RPF1, SPATA1 coding upstream 57129 481748 ~ 505206 (-)
CI01000058_00570327_00573074 NA coding upstream 145310 570273 ~ 573074 (-)
CI01000058_00599524_00634109 APC2 coding upstream 174216 599179 ~ 634109 (-)
CI01000058_00665144_00668842 NA coding upstream 240073 665036 ~ 668842 (-)
G247438 NA non-coding downstream 12452 383731 ~ 411690 (-)
G247437 NA non-coding downstream 63783 360119 ~ 360359 (-)
G247428 NA non-coding downstream 92543 331303 ~ 331599 (-)
G247363 NA non-coding downstream 309780 68204 ~ 114362 (-)
G247156 NA non-coding downstream 373821 50022 ~ 50321 (-)
G247472 NA non-coding upstream 1539 426502 ~ 426770 (-)
G247474 NA non-coding upstream 8952 433915 ~ 434123 (-)
G247487 NA non-coding upstream 83691 508654 ~ 509085 (-)
G247492 NA non-coding upstream 87841 512804 ~ 513019 (-)
G247592 NA other upstream 221480 646443 ~ 654949 (-)
CI01000058_02859435_02860658 FAM72A other upstream 2433520 2858483 ~ 2861491 (-)
G250230 NA other upstream 3263680 3688643 ~ 3696711 (-)

Expression


Co-expression Network